RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TRAPPC5Q8IUR0 188 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 CT55Q8WUE5 264 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 TTC25Q96NG3 672 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 BRD8Q9H0E9 1235 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 TRIM10Q9UDY6 481 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 TMPRSS11EQ9UL52 423 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 WDR37Q9Y2I8 494 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 SOWAHDA6NJG2 315 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 APOL1O14791 398 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 PPP1R12AO14974 1030 aaPredicted RBP19.39■□□□□ 0.69
VARS-221ENST00000463184 TMEM253P0C7T8 217 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 ZFXP17010 805 aaPredicted RBP19.39■□□□□ 0.69
VARS-221ENST00000463184 HMGCLP35914 325 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 SEMA5AQ13591 1074 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 ATP13A5Q4VNC0 1218 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 SIDT2Q8NBJ9 832 aaKnown RBP19.39■□□□□ 0.69
VARS-221ENST00000463184 GDAP1Q8TB36 358 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 DTX3LQ8TDB6 740 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 ANP32BQ92688 251 aaKnown RBP19.39■□□□□ 0.69
VARS-221ENST00000463184 SLC41A2Q96JW4 573 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 OLFM3Q96PB7 478 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 PACSIN1Q9BY11 444 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 GPR87Q9BY21 358 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 INTUQ9ULD6 942 aa19.39■□□□□ 0.69
VARS-221ENST00000463184 EPN1Q9Y6I3 576 aaPredicted RBP19.39■□□□□ 0.69
VARS-221ENST00000463184 IGHV5-51A0A0C4DH38 117 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 C3orf70A6NLC5 250 aaPredicted RBP19.38■□□□□ 0.69
VARS-221ENST00000463184 AURKAO14965 403 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 TIAF1O95411 115 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 MT-CYBP00156 380 aaPredicted RBP19.38■□□□□ 0.69
VARS-221ENST00000463184 FOLR1P15328 257 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 ACY1Q03154 408 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 DMPKQ09013 629 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 TUBB3Q13509 450 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 SPA17Q15506 151 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 TEX44Q53QW1 395 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 FAM182AQ5T1J6 154 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 ZDHHC20Q5W0Z9 365 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 AMZ2Q86W34 360 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 KMT5CQ86Y97 462 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 TMEM139Q8IV31 216 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 SPATA22Q8NHS9 363 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 TRABDQ9H4I3 376 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 GLOD4Q9HC38 313 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 LRRC4CQ9HCJ2 640 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 BPIFA1Q9NP55 256 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 LUC7LQ9NQ29 371 aaKnown RBP19.38■□□□□ 0.69
VARS-221ENST00000463184 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.38■□□□□ 0.69
VARS-221ENST00000463184 SPO11Q9Y5K1 396 aa19.38■□□□□ 0.69
VARS-221ENST00000463184 A0A0A6YYK5 440 aaPredicted RBP19.37■□□□□ 0.69
VARS-221ENST00000463184 BLACEA4D250 179 aa19.37■□□□□ 0.69
VARS-221ENST00000463184 MAGEA1P43355 309 aa19.37■□□□□ 0.69
VARS-221ENST00000463184 PPP1CAP62136 330 aa19.37■□□□□ 0.69
VARS-221ENST00000463184 MESDQ14696 234 aa19.37■□□□□ 0.69
VARS-221ENST00000463184 PWWP2BQ6NUJ5 590 aa19.37■□□□□ 0.69
VARS-221ENST00000463184 THAP4Q8WY91 577 aa19.37■□□□□ 0.69
VARS-221ENST00000463184 ZCCHC2Q9C0B9 1178 aaKnown RBP19.37■□□□□ 0.69
VARS-221ENST00000463184 ACTL8Q9H568 366 aa19.37■□□□□ 0.69
VARS-221ENST00000463184 DNMT3AQ9Y6K1 912 aaPredicted RBP19.37■□□□□ 0.69
VARS-221ENST00000463184 SPENQ96T58 3664 aaKnown RBP19.37■□□□□ 0.69
VARS-221ENST00000463184 VPS4BO75351 444 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 PMPCBO75439 489 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 POP7O75817 140 aaKnown RBP19.36■□□□□ 0.69
VARS-221ENST00000463184 IPO7O95373 1038 aaKnown RBP19.36■□□□□ 0.69
VARS-221ENST00000463184 PTPN4P29074 926 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 RPE65Q16518 533 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 UGT8Q16880 541 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 LDLRAP1Q5SW96 308 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 NPNTQ6UXI9 565 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 RAD9BQ6WBX8 426 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 TEKT5Q96M29 485 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 CD180Q99467 661 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 IL26Q9NPH9 171 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 VPS4AQ9UN37 437 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 PCDHA13Q9Y5I0 950 aa19.36■□□□□ 0.69
VARS-221ENST00000463184 USP9YO00507 2555 aaPredicted RBP19.35■□□□□ 0.69
VARS-221ENST00000463184 TTLL8A6PVC2 850 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 DNAJB5O75953 348 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 PDGFAP04085 211 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 ARHGAP25P42331 645 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 ARL4DP49703 201 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 RPS15P62841 145 aaKnown RBP19.35■□□□□ 0.69
VARS-221ENST00000463184 PDE1BQ01064 536 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 KCNAB1Q14722 419 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 BZW1Q7L1Q6 419 aaKnown RBP19.35■□□□□ 0.69
VARS-221ENST00000463184 SYVN1Q86TM6 617 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 RFX6Q8HWS3 928 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 LURAP1LQ8IV03 231 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 EFCAB3Q8N7B9 438 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 GALNT11Q8NCW6 608 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 GPR150Q8NGU9 434 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 ZNF514Q96K75 400 aaPredicted RBP19.35■□□□□ 0.69
VARS-221ENST00000463184 MAP3K3Q99759 626 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 TRIM55Q9BYV6 548 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 AKIRIN1Q9H9L7 192 aaPredicted RBP19.35■□□□□ 0.69
VARS-221ENST00000463184 FGF21Q9NSA1 209 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 UBP1Q9NZI7 540 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 FAM153AQ9UHL3 310 aa19.35■□□□□ 0.69
VARS-221ENST00000463184 LOC285095A0A1B0GVY8 99 aa19.34■□□□□ 0.69
VARS-221ENST00000463184 UBA6A0AVT1 1052 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms