RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 DNMT3AQ9Y6K1 912 aaPredicted RBP15.09■□□□□ 0.01
SKA3-204ENST00000462482 HECTD1Q9ULT8 2610 aa15.08■□□□□ 0
SKA3-204ENST00000462482 UBA6A0AVT1 1052 aaPredicted RBP15.08■□□□□ 0
SKA3-204ENST00000462482 C21orf140B9A014 251 aa15.08■□□□□ 0
SKA3-204ENST00000462482 CST8O60676 142 aa15.08■□□□□ 0
SKA3-204ENST00000462482 CREG1O75629 220 aa15.08■□□□□ 0
SKA3-204ENST00000462482 RECKO95980 971 aa15.08■□□□□ 0
SKA3-204ENST00000462482 NFKB1P19838 968 aa15.08■□□□□ 0
SKA3-204ENST00000462482 HLA-DPA1P20036 260 aa15.08■□□□□ 0
SKA3-204ENST00000462482 MSH3P20585 1137 aa15.08■□□□□ 0
SKA3-204ENST00000462482 FECHP22830 423 aa15.08■□□□□ 0
SKA3-204ENST00000462482 F8A1P23610 371 aa15.08■□□□□ 0
SKA3-204ENST00000462482 AKT1P31749 480 aa15.08■□□□□ 0
SKA3-204ENST00000462482 XRCC4Q13426 336 aa15.08■□□□□ 0
SKA3-204ENST00000462482 PRKD1Q15139 912 aaPredicted RBP15.08■□□□□ 0
SKA3-204ENST00000462482 IGFBP7Q16270 282 aa15.08■□□□□ 0
SKA3-204ENST00000462482 KHDC1Q4VXA5 237 aaKnown RBP15.08■□□□□ 0
SKA3-204ENST00000462482 SIRPB2Q5JXA9 342 aa15.08■□□□□ 0
SKA3-204ENST00000462482 DNTTIP2Q5QJE6 756 aaKnown RBP15.08■□□□□ 0
SKA3-204ENST00000462482 FAM182AQ5T1J6 154 aa15.08■□□□□ 0
SKA3-204ENST00000462482 KAZNQ674X7 775 aa15.08■□□□□ 0
SKA3-204ENST00000462482 TCTN3Q6NUS6 607 aa15.08■□□□□ 0
SKA3-204ENST00000462482 TMEM220Q6QAJ8 160 aa15.08■□□□□ 0
SKA3-204ENST00000462482 FAM151BQ6UXP7 276 aa15.08■□□□□ 0
SKA3-204ENST00000462482 PID1Q7Z2X4 250 aa15.08■□□□□ 0
SKA3-204ENST00000462482 KMT5CQ86Y97 462 aa15.08■□□□□ 0
SKA3-204ENST00000462482 BEND7Q8N7W2 519 aaPredicted RBP15.08■□□□□ 0
SKA3-204ENST00000462482 CD180Q99467 661 aa15.08■□□□□ 0
SKA3-204ENST00000462482 FSD1LQ9BXM9 530 aa15.08■□□□□ 0
SKA3-204ENST00000462482 LHX9Q9NQ69 397 aa15.08■□□□□ 0
SKA3-204ENST00000462482 ABHD10Q9NUJ1 306 aa15.08■□□□□ 0
SKA3-204ENST00000462482 SPTLC3Q9NUV7 552 aa15.08■□□□□ 0
SKA3-204ENST00000462482 ANKMY1Q9P2S6 941 aa15.08■□□□□ 0
SKA3-204ENST00000462482 PSMD13Q9UNM6 376 aa15.08■□□□□ 0
SKA3-204ENST00000462482 TP53TG5Q9Y2B4 290 aa15.08■□□□□ 0
SKA3-204ENST00000462482 MAN2B2Q9Y2E5 1009 aa15.08■□□□□ 0
SKA3-204ENST00000462482 WDR37Q9Y2I8 494 aa15.08■□□□□ 0
SKA3-204ENST00000462482 PCDHGA6Q9Y5G7 932 aa15.08■□□□□ 0
SKA3-204ENST00000462482 LOC285095A0A1B0GVY8 99 aa15.07■□□□□ 0
SKA3-204ENST00000462482 KLHL33A6NCF5 533 aa15.07■□□□□ 0
SKA3-204ENST00000462482 GOLGA6L3A6NEY3 463 aa15.07■□□□□ 0
SKA3-204ENST00000462482 STX7O15400 261 aaKnown RBP15.07■□□□□ 0
SKA3-204ENST00000462482 COMTP21964 271 aa15.07■□□□□ 0
SKA3-204ENST00000462482 PBLDP30039 288 aaPredicted RBP15.07■□□□□ 0
SKA3-204ENST00000462482 RPS15P62841 145 aaKnown RBP15.07■□□□□ 0
SKA3-204ENST00000462482 DMPKQ09013 629 aa15.07■□□□□ 0
SKA3-204ENST00000462482 MPP3Q13368 585 aa15.07■□□□□ 0
SKA3-204ENST00000462482 KRT33BQ14525 404 aa15.07■□□□□ 0
SKA3-204ENST00000462482 CHRNA6Q15825 494 aa15.07■□□□□ 0
SKA3-204ENST00000462482 RPE65Q16518 533 aa15.07■□□□□ 0
SKA3-204ENST00000462482 TMTC4Q5T4D3 741 aa15.07■□□□□ 0
SKA3-204ENST00000462482 ASB18Q6ZVZ8 466 aa15.07■□□□□ 0
SKA3-204ENST00000462482 C11orf96Q7Z7L8 435 aa15.07■□□□□ 0
SKA3-204ENST00000462482 OOSP2Q86WS3 158 aa15.07■□□□□ 0
SKA3-204ENST00000462482 TTC30BQ8N4P2 665 aa15.07■□□□□ 0
SKA3-204ENST00000462482 DDHD1Q8NEL9 900 aa15.07■□□□□ 0
SKA3-204ENST00000462482 IPMKQ8NFU5 416 aa15.07■□□□□ 0
SKA3-204ENST00000462482 SLC41A2Q96JW4 573 aa15.07■□□□□ 0
SKA3-204ENST00000462482 FCRL5Q96RD9 977 aa15.07■□□□□ 0
SKA3-204ENST00000462482 IMP3Q9NV31 184 aaKnown RBP15.07■□□□□ 0
SKA3-204ENST00000462482 IL17CQ9P0M4 197 aa15.07■□□□□ 0
SKA3-204ENST00000462482 SAE1Q9UBE0 346 aaPredicted RBP15.07■□□□□ 0
SKA3-204ENST00000462482 TRHDEQ9UKU6 1024 aa15.07■□□□□ 0
SKA3-204ENST00000462482 TMPRSS11EQ9UL52 423 aa15.07■□□□□ 0
SKA3-204ENST00000462482 INTUQ9ULD6 942 aa15.07■□□□□ 0
SKA3-204ENST00000462482 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.07■□□□□ 0
SKA3-204ENST00000462482 OR2AG2A6NM03 316 aa15.06■□□□□ 0
SKA3-204ENST00000462482 PSTPIP1O43586 416 aa15.06■□□□□ 0
SKA3-204ENST00000462482 UGT1A9O60656 530 aa15.06■□□□□ 0
SKA3-204ENST00000462482 ZRANB2O95218 330 aaKnown RBP eCLIP15.06■□□□□ 0
SKA3-204ENST00000462482 PYGMP11217 842 aa15.06■□□□□ 0
SKA3-204ENST00000462482 UGT1A6P19224 532 aa15.06■□□□□ 0
SKA3-204ENST00000462482 UGT1A1P22309 533 aa15.06■□□□□ 0
SKA3-204ENST00000462482 UGT1A4P22310 534 aa15.06■□□□□ 0
SKA3-204ENST00000462482 CD68P34810 354 aaPredicted RBP15.06■□□□□ 0
SKA3-204ENST00000462482 CDKN2BP42772 138 aa15.06■□□□□ 0
SKA3-204ENST00000462482 PMS2P54278 862 aa15.06■□□□□ 0
SKA3-204ENST00000462482 HSD11B2P80365 405 aa15.06■□□□□ 0
SKA3-204ENST00000462482 WASHC5Q12768 1159 aa15.06■□□□□ 0
SKA3-204ENST00000462482 NOMO1Q15155 1222 aa15.06■□□□□ 0
SKA3-204ENST00000462482 SLC1A5Q15758 541 aa15.06■□□□□ 0
SKA3-204ENST00000462482 GPRC6AQ5T6X5 926 aa15.06■□□□□ 0
SKA3-204ENST00000462482 CCDC181Q5TID7 509 aa15.06■□□□□ 0
SKA3-204ENST00000462482 KDELC1Q6UW63 502 aa15.06■□□□□ 0
SKA3-204ENST00000462482 SPOCD1Q6ZMY3 1216 aa15.06■□□□□ 0
SKA3-204ENST00000462482 ZC3H18Q86VM9 953 aaKnown RBP15.06■□□□□ 0
SKA3-204ENST00000462482 CCDC50Q8IVM0 306 aa15.06■□□□□ 0
SKA3-204ENST00000462482 RASGEF1AQ8N9B8 481 aa15.06■□□□□ 0
SKA3-204ENST00000462482 CT55Q8WUE5 264 aa15.06■□□□□ 0
SKA3-204ENST00000462482 CHP1Q99653 195 aa15.06■□□□□ 0
SKA3-204ENST00000462482 GPR87Q9BY21 358 aa15.06■□□□□ 0
SKA3-204ENST00000462482 UGT1A7Q9HAW7 530 aa15.06■□□□□ 0
SKA3-204ENST00000462482 UGT1A10Q9HAW8 530 aa15.06■□□□□ 0
SKA3-204ENST00000462482 UGT1A8Q9HAW9 530 aa15.06■□□□□ 0
SKA3-204ENST00000462482 FGF21Q9NSA1 209 aa15.06■□□□□ 0
SKA3-204ENST00000462482 HRASLS2Q9NWW9 162 aa15.06■□□□□ 0
SKA3-204ENST00000462482 RSPH14Q9UHP6 348 aa15.06■□□□□ 0
SKA3-204ENST00000462482 ACSL5Q9ULC5 683 aa15.06■□□□□ 0
SKA3-204ENST00000462482 HYOU1Q9Y4L1 999 aa15.06■□□□□ 0
SKA3-204ENST00000462482 IGHV5-51A0A0C4DH38 117 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms