RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 MMP27Q9H306 513 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 RAD21L1Q9H4I0 556 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 EBF2Q9HAK2 575 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 SELENONQ9NZV5 590 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 RCC2Q9P258 522 aaKnown RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 CPSF2Q9P2I0 782 aaKnown RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 KLHL9Q9P2J3 617 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 LARSQ9P2J5 1176 aaKnown RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 NFKBIL1Q9UBC1 381 aaPredicted RBP3.3□□□□□ -1.88
RFC4-211ENST00000460408 GAGE2DQ9UEU5 116 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 KCNS2Q9ULS6 477 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 OR2W1Q9Y3N9 320 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 PCDHGA5Q9Y5G8 931 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 KAT6BQ8WYB5 2073 aa3.3□□□□□ -1.88
RFC4-211ENST00000460408 CGNL1Q0VF96 1302 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 hCG_1809904A0A1W2PP81 198 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 A0A1W2PPE2 198 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 A0A1W2PR64 198 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 OR2M5A3KFT3 312 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 C5orf60A6NFR6 353 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 SLC28A2O43868 658 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 CAMTA2O94983 1202 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 DAOP14920 347 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 LIG4P49917 911 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 PPP5CP53041 499 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 CTSCP53634 463 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 COG7P83436 770 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 ZBTB17Q13105 803 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 SNTA1Q13424 505 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 KEAP1Q14145 624 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 SF3B4Q15427 424 aaKnown RBP eCLIP3.29□□□□□ -1.886e-7■■■■■ 30.8
RFC4-211ENST00000460408 KYNUQ16719 465 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 TMEM266Q2M3C6 531 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 C9orf57Q5W0N0 161 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 ZDHHC20Q5W0Z9 365 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 TRNP1Q6NT89 227 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 TEX38Q6PEX7 206 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.29□□□□□ -1.883e-11■□□□□ 10.5
RFC4-211ENST00000460408 ZNF704Q6ZNC4 412 aaPredicted RBP3.29□□□□□ -1.88
RFC4-211ENST00000460408 ASB18Q6ZVZ8 466 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 TMPRSS12Q86WS5 348 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 POGLUT1Q8NBL1 392 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 CCDC191Q8NCU4 936 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 OR10S1Q8NGN2 331 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 LNX1Q8TBB1 728 aaPredicted RBP3.29□□□□□ -1.88
RFC4-211ENST00000460408 TBC1D16Q8TBP0 767 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 TAS1R2Q8TE23 839 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 FIG4Q92562 907 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 LPGAT1Q92604 370 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 RTP4Q96DX8 246 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 PGAP3Q96FM1 320 aaPredicted RBP3.29□□□□□ -1.88
RFC4-211ENST00000460408 BICD1Q96G01 975 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 TM6SF1Q9BZW5 370 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 SLC35C2Q9NQQ7 365 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 KLHL1Q9NR64 748 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 TAS2R14Q9NYV8 317 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 MDFICQ9P1T7 246 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 HACL1Q9UJ83 578 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 ZNF711Q9Y462 761 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 TRPV2Q9Y5S1 764 aa3.29□□□□□ -1.88
RFC4-211ENST00000460408 PRAG1Q86YV5 1406 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 A0A0G2JPF8 293 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 ZCWPW2A0A1B0GU75 182 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 CTAGE9A4FU28 777 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 MAGEA13PA6NCF6 341 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 OR5K3A6NET4 321 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 A6NL46 340 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 LACTBL1A8MY62 500 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 HNRNPCL3B7ZW38 293 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 TMEM178BH3BS89 294 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 PLK4O00444 970 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 PSMD10O75832 226 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 TOMM70O94826 608 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 ZWINTO95229 277 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 BCL10O95999 233 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 ABCB1P08183 1280 aaPredicted RBP3.28□□□□□ -1.88
RFC4-211ENST00000460408 CTAGE8P0CG41 777 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 FAM106CPP0CH98 169 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 HNRNPCL4P0DMR1 293 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 USP8P40818 1118 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 LMAN1P49257 510 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 ISL1P61371 349 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 AIMP1Q12904 312 aaKnown RBP3.28□□□□□ -1.88
RFC4-211ENST00000460408 ILF3Q12906 894 aaKnown RBP eCLIP3.28□□□□□ -1.88
RFC4-211ENST00000460408 SNTB1Q13884 538 aaKnown RBP3.28□□□□□ -1.88
RFC4-211ENST00000460408 IL11RAQ14626 422 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 MELKQ14680 651 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 RAD9BQ6WBX8 426 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 MAP7D3Q8IWC1 876 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 CTAGE4Q8IX94 777 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 DCP1BQ8IZD4 617 aaKnown RBP3.28□□□□□ -1.88
RFC4-211ENST00000460408 POMGNT2Q8NAT1 580 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 RBM15BQ8NDT2 890 aaKnown RBP3.28□□□□□ -1.88
RFC4-211ENST00000460408 OR52I2Q8NH67 350 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 BBS10Q8TAM1 723 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 WDR20Q8TBZ3 569 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 ERLEC1Q96DZ1 483 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 MED30Q96HR3 178 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 NEK1Q96PY6 1258 aa3.28□□□□□ -1.88
RFC4-211ENST00000460408 DDX31Q9H8H2 851 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms