RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 PLD4Q96BZ4 506 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 RMND5BQ96G75 393 aaPredicted RBP17.91■□□□□ 0.46
HPS3-202ENST00000460120 CDK5RAP1Q96SZ6 601 aaKnown RBP17.91■□□□□ 0.46
HPS3-202ENST00000460120 FEM1AQ9BSK4 669 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 ASB8Q9H765 288 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 NANOGQ9H9S0 305 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 ZFP14Q9HCL3 533 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 FARSBQ9NSD9 589 aaKnown RBP17.91■□□□□ 0.46
HPS3-202ENST00000460120 YIPF1Q9Y548 306 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 EI24O14681 340 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 CLDN7O95471 211 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 OR4D2P58180 307 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 PRMT9Q6P2P2 845 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 SPATA19Q7Z5L4 167 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 PROKR1Q8TCW9 393 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 MAGEE2Q8TD90 523 aaPredicted RBP17.9■□□□□ 0.46
HPS3-202ENST00000460120 NCSTNQ92542 709 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 RNF145Q96MT1 663 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 HMX1Q9NP08 348 aaPredicted RBP17.9■□□□□ 0.46
HPS3-202ENST00000460120 OLAHQ9NV23 265 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 ACTR3BQ9P1U1 418 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 MTRRQ9UBK8 725 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 AFF4Q9UHB7 1163 aaKnown RBP17.9■□□□□ 0.46
HPS3-202ENST00000460120 RIMKLBQ9ULI2 386 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 STX16O14662 325 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 RSL1D1O76021 490 aaKnown RBP17.9■□□□□ 0.46
HPS3-202ENST00000460120 H6PDO95479 791 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 ERVK-8P63133 956 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 APOFQ13790 326 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 SLC44A4Q53GD3 710 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 XKR7Q5GH72 579 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 OTUD3Q5T2D3 398 aaPredicted RBP17.9■□□□□ 0.46
HPS3-202ENST00000460120 SLC8B1Q6J4K2 584 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 CLHC1Q8NHS4 586 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 KCNJ9Q92806 393 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 MYO19Q96H55 970 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 CLPBQ9H078 707 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 ELAC1Q9H777 363 aaKnown RBP17.9■□□□□ 0.46
HPS3-202ENST00000460120 IPPKQ9H8X2 491 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 ARMC1Q9NVT9 282 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 CNOT11Q9UKZ1 510 aaKnown RBP17.9■□□□□ 0.46
HPS3-202ENST00000460120 MYRFQ9Y2G1 1151 aa17.9■□□□□ 0.46
HPS3-202ENST00000460120 HMGCS1Q01581 520 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 RFTN2Q52LD8 501 aaPredicted RBP17.89■□□□□ 0.45
HPS3-202ENST00000460120 NHSL2Q5HYW2 709 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 ARMC12Q5T9G4 340 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 TXNDC11Q6PKC3 985 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 ANKFN1Q8N957 763 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 DDI1Q8WTU0 396 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.89■□□□□ 0.45
HPS3-202ENST00000460120 KLF16Q9BXK1 252 aaPredicted RBP17.89■□□□□ 0.45
HPS3-202ENST00000460120 RIC8BQ9NVN3 520 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 IL17CQ9P0M4 197 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 CLEC4EQ9ULY5 219 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 PRMT5O14744 637 aaPredicted RBP17.89■□□□□ 0.45
HPS3-202ENST00000460120 VPS4BO75351 444 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 SLC25A14O95258 325 aaPredicted RBP17.89■□□□□ 0.45
HPS3-202ENST00000460120 S100BP04271 92 aaPredicted RBP17.89■□□□□ 0.45
HPS3-202ENST00000460120 HSD17B1P14061 328 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 SLC2A4P14672 509 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 PTGER3P43115 390 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 RPL38P63173 70 aaKnown RBP17.89■□□□□ 0.45
HPS3-202ENST00000460120 BFSP2Q13515 415 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 GTF2H2Q13888 395 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 MAP7Q14244 749 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 PTGR1Q14914 329 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 GTF2H2CQ6P1K8 395 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 TMEM199Q8N511 208 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 FIBCD1Q8N539 461 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 PDZD8Q8NEN9 1154 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 UHRF1Q96T88 793 aaPredicted RBP17.89■□□□□ 0.45
HPS3-202ENST00000460120 RPF2Q9H7B2 306 aaKnown RBP17.89■□□□□ 0.45
HPS3-202ENST00000460120 AGPAT4Q9NRZ5 378 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 ELOVL2Q9NXB9 296 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 ZNHIT2Q9UHR6 403 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 LEF1Q9UJU2 399 aaPredicted RBP17.89■□□□□ 0.45
HPS3-202ENST00000460120 VPS9D1Q9Y2B5 631 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 ANGPTL3Q9Y5C1 460 aa17.89■□□□□ 0.45
HPS3-202ENST00000460120 OR7A17O14581 309 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 HNRNPRO43390 633 aaKnown RBP17.88■□□□□ 0.45
HPS3-202ENST00000460120 BMP2P12643 396 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 GJA1P17302 382 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 HMOX2P30519 316 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 TXNL4AP83876 142 aaKnown RBP17.88■□□□□ 0.45
HPS3-202ENST00000460120 SMARCB1Q12824 385 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 PHKG1Q16816 387 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 AP5B1Q2VPB7 878 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 ZIK1Q3SY52 487 aaPredicted RBP17.88■□□□□ 0.45
HPS3-202ENST00000460120 PYCR3Q53H96 274 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 ACBD5Q5T8D3 534 aaPredicted RBP17.88■□□□□ 0.45
HPS3-202ENST00000460120 PPP4R4Q6NUP7 873 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 TTC33Q6PID6 262 aaPredicted RBP17.88■□□□□ 0.45
HPS3-202ENST00000460120 B3GNT6Q6ZMB0 384 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 LRRC43Q8N309 656 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 C2orf15Q8WU43 125 aaKnown RBP17.88■□□□□ 0.45
HPS3-202ENST00000460120 ZUFSPQ96AP4 578 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 LATS2Q9NRM7 1088 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 KRT87PA6NCN2 255 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 FFAR2O15552 330 aa17.88■□□□□ 0.45
HPS3-202ENST00000460120 ALDH1A1P00352 501 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms