RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CDH4P55283 916 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 FOXA1P55317 472 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 UFM1P61960 85 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 PURAQ00577 322 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 GNA12Q03113 381 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 MVKQ03426 396 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 CACNG1Q06432 222 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 CYP4F3Q08477 520 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 ELAVL2Q12926 359 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 NFATC3Q12968 1075 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TRIM32Q13049 653 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZNF177Q13360 481 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 PMS2P3Q13401 168 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 BFSP2Q13515 415 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 EIF4EBP2Q13542 120 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 KRR1Q13601 381 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 ATP1A4Q13733 1029 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 GTF2H2Q13888 395 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 ACOX1Q15067 660 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 PCBP2Q15366 365 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TGFBIQ15582 683 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 FXNQ16595 210 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 MAPKAPK3Q16644 382 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 DGUOKQ16854 277 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TTLL9Q3SXZ7 439 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 CTXN3Q4LDR2 81 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 PAN2Q504Q3 1202 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 CCDC92Q53HC0 331 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 CYBRD1Q53TN4 286 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 RABL3Q5HYI8 236 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 HABP4Q5JVS0 413 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 C6orf136Q5SQH8 315 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 VARS2Q5ST30 1063 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 MORN1Q5T089 497 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 OTUD3Q5T2D3 398 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 C9orf131Q5VYM1 1079 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 MFSD14CQ5VZR4 134 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 ALG1LQ6GMV1 187 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 PTRHD1Q6GMV3 140 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 NANOGP8Q6NSW7 305 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TMEM214Q6NUQ4 689 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 FBXL22Q6P050 247 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 GTF2H2CQ6P1K8 395 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 FAM117BQ6P1L5 589 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TTC23LQ6PF05 361 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 PAQR3Q6TCH7 311 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 CYP20A1Q6UW02 462 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TMEM207Q6UWW9 146 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 CERS6Q6ZMG9 384 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 LINC00299Q6ZSB3 139 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 RNF165Q6ZSG1 346 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 MSANTD1Q6ZTZ1 278 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 USP51Q70EK9 711 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 CHST9Q7L1S5 443 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 LRRC8DQ7L1W4 858 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 LYSMD3Q7Z3D4 306 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 NECAB2Q7Z6G3 386 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 MILR1Q7Z6M3 343 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 SCD5Q86SK9 330 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 SYVN1Q86TM6 617 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 LDB1Q86U70 411 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TRIM74Q86UV6 250 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TRIM73Q86UV7 250 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 SERINC5Q86VE9 423 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 MIB1Q86YT6 1006 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 PHYKPLQ8IUZ5 450 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 MICU2Q8IYU8 434 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 LGI2Q8N0V4 545 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 ELMOD1Q8N336 334 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 PARP8Q8N3A8 854 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TCAIMQ8N3R3 496 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZCCHC7Q8N3Z6 543 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 EFHBQ8N7U6 833 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 C2orf69Q8N8R5 385 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 CDYL2Q8N8U2 506 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 C3orf58Q8NDZ4 430 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 OR4K2Q8NGD2 314 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 OR52E4Q8NGH9 312 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 OR13C4Q8NGS5 318 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 ARRDC2Q8TBH0 407 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TBC1D15Q8TC07 691 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 HASPINQ8TF76 798 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 SLC13A3Q8WWT9 602 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 BRI3BPQ8WY22 251 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 STARD8Q92502 1023 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 FIG4Q92562 907 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 RORBQ92753 470 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TMBIM1Q969X1 311 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 FUBP1Q96AE4 644 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 TADA1Q96BN2 335 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 FAM120BQ96EK7 910 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 CDKN2AIPNLQ96HQ2 116 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 ITCHQ96J02 903 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 MAGEB10Q96LZ2 347 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 GLT1D1Q96MS3 346 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 NSUN5Q96P11 429 aaKnown RBP3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 PHF12Q96QT6 1004 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 KCNA7Q96RP8 456 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 PKMYT1Q99640 499 aa3.29□□□□□ -1.88
HMGN1P18-201ENST00000457642 SLC30A3Q99726 388 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms