RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SULT2A1Q06520 285 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 GALNT2Q10471 571 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 TBL3Q12788 808 aaKnown RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 OVGP1Q12889 678 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ABRQ12979 859 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 NR1D2Q14995 579 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 KARSQ15046 597 aaKnown RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 SF3B4Q15427 424 aaKnown RBP eCLIP5.38□□□□□ -1.556e-8■□□□□ 10.4
VPS41-209ENST00000457055 GPR68Q15743 365 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ZNF829Q3KNS6 432 aaPredicted RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 PLEKHO1Q53GL0 409 aaPredicted RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 PLAC9Q5JTB6 97 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 PLEKHS1Q5SXH7 462 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 THEMIS2Q5TEJ8 643 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 BROXQ5VW32 411 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 TMEM200BQ69YZ2 307 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 SARM1Q6SZW1 724 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 SMIM5Q71RC9 77 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ANO5Q75V66 913 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 UTS2BQ765I0 119 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 PLPPR4Q7Z2D5 763 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 RASAL3Q86YV0 1011 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 CCDC50Q8IVM0 306 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ZC3H7AQ8IWR0 971 aaKnown RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 KDM8Q8N371 416 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 SLC25A41Q8N5S1 370 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 CEP112Q8N8E3 955 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 CCDC112Q8NEF3 446 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 OR5T1Q8NG75 326 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 OR10H5Q8NGA6 315 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 OR14K1Q8NGZ2 314 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ST7LQ8TDW4 575 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 STYXQ8WUJ0 223 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 NEU4Q8WWR8 484 aaPredicted RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 THAP4Q8WY91 577 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 MRPS27Q92552 414 aaKnown RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 OPALINQ96PE5 141 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 TWNKQ96RR1 684 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 JPH2Q9BR39 696 aaPredicted RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 WACQ9BTA9 647 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ZSCAN5AQ9BUG6 496 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 CCDC28BQ9BUN5 200 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 AMNQ9BXJ7 453 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 RAB33BQ9H082 229 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 OR10A5Q9H207 317 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 GBA3Q9H227 469 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 LRMDAQ9H2I8 198 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 TRPC7Q9HCX4 862 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 NT5MQ9NPB1 228 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 NGBQ9NPG2 151 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ARHGEF3Q9NR81 526 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 CCM2LQ9NUG4 571 aaPredicted RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 EURLQ9NYK6 297 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 NDUFAF4Q9P032 175 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 HACD3Q9P035 362 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 PSMC3IPQ9P2W1 217 aaPredicted RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 TMPRSS11EQ9UL52 423 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 CORO1CQ9ULV4 474 aaPredicted RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 SPATA2Q9UM82 520 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 STXBP5LQ9Y2K9 1186 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 AP3M1Q9Y2T2 418 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 SAMHD1Q9Y3Z3 626 aaKnown RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 NFE2L3Q9Y4A8 694 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 PCDHA9Q9Y5H5 950 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 SALL3Q9BXA9 1300 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 KIAA1217Q5T5P2 1943 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 DAPK1P53355 1430 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ATP7BP35670 1465 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 NRXN1Q9ULB1 1477 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 SBF1O95248 1867 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 SMCO2A6NFE2 343 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 OR6C70A6NIJ9 312 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 H0YJX3 145 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 PGRMC1O00264 195 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 FRAT2O75474 233 aaPredicted RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 CLPXO76031 633 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 CIAO1O76071 339 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 TNFRSF6BO95407 300 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 MT-ATP6P00846 226 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 AGTP01019 485 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 TGFAP01135 160 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 PCCBP05166 539 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 THRBP10828 461 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 PKMP14618 531 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 POLR2CP19387 275 aaPredicted RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 RAB4AP20338 218 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 PTPN3P26045 913 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 CST5P28325 142 aaPredicted RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 PTPN4P29074 926 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 TM4SF1P30408 202 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 HNRNPH1P31943 449 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 SLC26A3P40879 764 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 PAFAH1B1P43034 410 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 ACADVLP49748 655 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 COPB1P53618 953 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 OAZ1P54368 228 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 RAB4BP61018 213 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 ACTR2P61160 394 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 RPS3AP61247 264 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 STX1BP61266 288 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms