RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 XRCC1P18887 633 aaPredicted RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 PAMP19021 973 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 NMBRP28336 390 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 CDKN1CP49918 316 aaPredicted RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 TERF1P54274 439 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 CLDN6P56747 220 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 UBE2IP63279 158 aaKnown RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 CRADDP78560 199 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 HHEXQ03014 270 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 BIRC2Q13490 618 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 SQSTM1Q13501 440 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 CAMK2BQ13554 666 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 KCTD19Q17RG1 926 aaPredicted RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 FASTKD1Q53R41 847 aaKnown RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 KIAA0930Q6ICG6 404 aaPredicted RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 DET1Q7L5Y6 550 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 ZNF572Q7Z3I7 529 aaPredicted RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 SPATA4Q8NEY3 305 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 OR6P1Q8NGX9 317 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 OR2L2Q8NH16 312 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 HM13Q8TCT9 377 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 GATA6Q92908 595 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 TRIM44Q96DX7 344 aaPredicted RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 CCDC97Q96F63 343 aaPredicted RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 GFM1Q96RP9 751 aaKnown RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 LRRN3Q9H3W5 708 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 UCK1Q9HA47 277 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 PRDM8Q9NQV8 689 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 CATSPERZQ9NTU4 200 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.35□□□□□ -1.07
SP140-207ENST00000456542 SAMD15Q9P1V8 674 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 ANAPC5Q9UJX4 755 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 DNAJC16Q9Y2G8 782 aa8.35□□□□□ -1.07
SP140-207ENST00000456542 FAM149AA5PLN7 773 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 TMEM8BA6NDV4 472 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 LILRA5A6NI73 299 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 F8W8V4 182 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 GOLGA8MH3BSY2 632 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 TTI1O43156 1089 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 B4GAT1O43505 415 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 CSO75390 466 aaKnown RBP8.34□□□□□ -1.07
SP140-207ENST00000456542 SEC31AO94979 1220 aaKnown RBP8.34□□□□□ -1.07
SP140-207ENST00000456542 CPNE6O95741 557 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 BRAFP15056 766 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 ARNTP27540 789 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 RPL10P27635 214 aaKnown RBP8.34□□□□□ -1.07
SP140-207ENST00000456542 HALP42357 657 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 TTPAP49638 278 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 PDX1P52945 283 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 EPHA4P54764 986 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 CCL7P80098 99 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 GPLD1P80108 840 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 TARDBPQ13148 414 aaKnown RBP eCLIP8.34□□□□□ -1.07
SP140-207ENST00000456542 NFE2L1Q14494 772 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 MORF4L2Q15014 288 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 ISXQ2M1V0 245 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 ZNF658BQ4V348 819 aaPredicted RBP8.34□□□□□ -1.07
SP140-207ENST00000456542 IZUMO3Q5VZ72 239 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 METRNLQ641Q3 311 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 UNQ6494/PRO21346Q6UXR6 183 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 FAM83HQ6ZRV2 1179 aaPredicted RBP8.34□□□□□ -1.07
SP140-207ENST00000456542 MICALCLQ6ZW33 695 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 MAATS1Q7Z4T9 603 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 TMEM135Q86UB9 458 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 RBM12BQ8IXT5 1001 aaKnown RBP8.34□□□□□ -1.07
SP140-207ENST00000456542 CLDN19Q8N6F1 224 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 BEND7Q8N7W2 519 aaPredicted RBP8.34□□□□□ -1.07
SP140-207ENST00000456542 MFSD3Q96ES6 412 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 SNF8Q96H20 258 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 SIGLEC10Q96LC7 697 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 KRT12Q99456 494 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 SLC38A3Q99624 504 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 DPYSL5Q9BPU6 564 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 TRIM51Q9BSJ1 452 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 NRSN2Q9GZP1 204 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 EPB41L1Q9H4G0 881 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
SP140-207ENST00000456542 ZNF624Q9P2J8 865 aaPredicted RBP8.34□□□□□ -1.07
SP140-207ENST00000456542 CPNE7Q9UBL6 633 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 DKK4Q9UBT3 224 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 CDC23Q9UJX2 597 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 ACSL5Q9ULC5 683 aa8.34□□□□□ -1.07
SP140-207ENST00000456542 ACACAQ13085 2346 aa8.34□□□□□ -1.08
SP140-207ENST00000456542 TRBV23OR9-2A0A075B6M9 112 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 IGHV1OR21-1A0A087WYE8 117 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 ZCWPW2A0A1B0GU75 182 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 FAM187AA6NFU0 413 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 EFCAB8A8MWE9 144 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 TMX2-CTNND1H3BSU7 103 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 PRMT5O14744 637 aaPredicted RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 PFDN6O15212 129 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 CD3EAPO15446 510 aaKnown RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 USP1O94782 785 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 VAPBO95292 243 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 VIPP01282 170 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 FTH1P02794 183 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 SLC35G4P0C7Q5 338 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 OR56A5P0C7T3 313 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 OGNP20774 298 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms