RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TSPY1Q01534 308 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 TNFAIP1Q13829 316 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 LAPTM4AQ15012 233 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 SMN1Q16637 294 aaKnown RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 FAM209AQ5JX71 171 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 KIAA0319Q5VV43 1072 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 ZNF549Q6P9A3 640 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 B3GNT8Q7Z7M8 397 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 ARHGAP12Q8IWW6 846 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 OR10Q1Q8NGQ4 319 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 MCFD2Q8NI22 146 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 CALML6Q8TD86 181 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 ESAMQ96AP7 390 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 RDH12Q96NR8 316 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 GAD1Q99259 594 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 MED10Q9BTT4 135 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 NXF3Q9H4D5 531 aaKnown RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 ZBTB20Q9HC78 741 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 TBC1D14Q9P2M4 693 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 DNAJB9Q9UBS3 223 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 LIMD1Q9UGP4 676 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 ZNF225Q9UK10 706 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 CAB39Q9Y376 341 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 CENPFP49454 3210 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 TYW5A2RUC4 315 aaKnown RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 ENPP3O14638 875 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 RAD51BO15315 384 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 NDST3O95803 873 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 CCNCP24863 283 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 HOXA11P31270 313 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 AGTR2P50052 363 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 AIF1P55008 147 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 GEMP55040 296 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 ARPC4P59998 168 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 YWHAHQ04917 246 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 LCP2Q13094 533 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 TOP3AQ13472 1001 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 SIM2Q14190 667 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 PTPRCAPQ14761 206 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 RSBN1Q5VWQ0 802 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 RAB44Q7Z6P3 723 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 C14orf80Q86SX3 495 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 LRRC49Q8IUZ0 686 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 CCDC103Q8IW40 242 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 CELF2-AS1Q8N7Q2 184 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 TSPEARQ8WU66 669 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 RNF34Q969K3 372 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 ZNF583Q96ND8 569 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 CYP2S1Q96SQ9 504 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 HBEGFQ99075 208 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 RBM4BQ9BQ04 359 aaKnown RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 RBM4Q9BWF3 364 aaKnown RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 SLC39A8Q9C0K1 460 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 FAM49AQ9H0Q0 323 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 MOV10Q9HCE1 1003 aaKnown RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 WDR70Q9NW82 654 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 COMMD8Q9NX08 183 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 SMPD4Q9NXE4 827 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 ERAP1Q9NZ08 941 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 TMEFF2Q9UIK5 374 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-208ENST00000456385 OSGIN1Q9UJX0 560 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 IKZF3Q9UKT9 509 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 PCDHGB1Q9Y5G3 927 aa10.19□□□□□ -0.78
CLIP4-208ENST00000456385 EIF3FO00303 357 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 PIRO00625 290 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 BCKDKO14874 412 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 HOXC11O43248 304 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 CCNKO75909 580 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 RECQL4O94761 1208 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 MT-ND2P03891 347 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 NTRK1P04629 796 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 CCDC159P0C7I6 412 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 MAXP61244 160 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 RACK1P63244 317 aaKnown RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 SOX4Q06945 474 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ACOX1Q15067 660 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 PPP2R2DQ66LE6 453 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 SPATA19Q7Z5L4 167 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 SYVN1Q86TM6 617 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 PLD3Q8IV08 490 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 LACC1Q8IV20 430 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 FNDC5Q8NAU1 212 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 PYCR2Q96C36 320 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 SLC47A1Q96FL8 570 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 TNIP3Q96KP6 325 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ASB2Q96Q27 587 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ATOH8Q96SQ7 321 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 C17orf80Q9BSJ5 609 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 PRKD2Q9BZL6 878 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 BRINP2Q9C0B6 783 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 C6orf62Q9GZU0 229 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-208ENST00000456385 ADGRE2Q9UHX3 823 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 HACL1Q9UJ83 578 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 C3orf18Q9UK00 162 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 NEUROG3Q9Y4Z2 214 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 PCDHB14Q9Y5E9 798 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 CSADQ9Y600 493 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 SUPT3HB4E1H0 165 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 C19orf81C9J6K1 198 aa10.18□□□□□ -0.78
CLIP4-208ENST00000456385 MATN3O15232 486 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms