RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 UBQLNLQ8IYU4 475 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PCIF1Q9H4Z3 704 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ZFYVE28Q9HCC9 887 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PAK1IP1Q9NWT1 392 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 MIOSQ9NXC5 875 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 COL20A1Q9P218 1284 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 OR2AG2A6NM03 316 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 GSC2O15499 205 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CBSLP0DN79 551 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PTPN1P18031 435 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 DRD4P21917 467 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 GCSHP23434 173 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 LCN1P31025 176 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CBSP35520 551 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 KCNJ1P48048 391 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PLK1P53350 603 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SYVN1Q86TM6 617 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 EGFL6Q8IUX8 553 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 WNT8BQ93098 351 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 KCTD12Q96CX2 325 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 FAM163AQ96GL9 167 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PI4K2AQ9BTU6 479 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 OSBPL2Q9H1P3 480 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 RIOX1Q9H6W3 641 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 GLOD4Q9HC38 313 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SEC14L3Q9UDX4 400 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CDH22Q9UJ99 828 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PRRG1O14668 218 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 AP2A2O94973 939 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SLC2A2P11168 524 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SLC6A3Q01959 620 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 KCNC4Q03721 635 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 OCLNQ16625 522 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 DUPD1Q68J44 220 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 STYK1Q6J9G0 422 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 C2orf69Q8N8R5 385 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF527Q8NB42 609 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ELP5Q8TE02 316 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TRUB1Q8WWH5 349 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 BAP1Q92560 729 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 IL20Q9NYY1 176 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CCDC167Q9P0B6 97 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 UBQLN2Q9UHD9 624 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SMLR1H3BR10 107 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 FABP3P05413 133 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 CPB1P15086 417 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ATP5A1P25705 553 aaKnown RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PTBP1P26599 531 aaKnown RBP eCLIP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GSTM2P28161 218 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ATP4BP51164 291 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 EPHB3P54753 998 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 CDKL4Q5MAI5 379 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TSTD2Q5T7W7 516 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 IL31Q6EBC2 164 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 VSTM1Q6UX27 236 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 RNF180Q86T96 592 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ADGRF2Q8IZF7 708 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SLC7A13Q8TCU3 470 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PHF12Q96QT6 1004 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 APOL5Q9BWW9 433 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GON7Q9BXV9 100 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF222Q9UK12 451 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 CCDC168Q8NDH2 2452 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 HCN1O60741 890 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ETFAP13804 333 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ATP5C1P36542 298 aaKnown RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF211Q13398 564 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF234Q14588 700 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TAF13Q15543 124 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 METTL7BQ6UX53 244 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 CARNMT1Q8N4J0 409 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TTC16Q8NEE8 873 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SLC38A4Q969I6 547 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 A3GALT2U3KPV4 340 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SEC22BO75396 215 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 MT-CO2P00403 227 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 IMPDH1P20839 514 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ECHS1P30084 290 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 MATKP42679 507 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 MFSD10Q14728 455 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM119Q4V9L6 283 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SIRT2Q8IXJ6 389 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 REM2Q8IYK8 340 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GDPD1Q8N9F7 314 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 HGH1Q9BTY7 390 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SLC29A3Q9BZD2 475 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 KATNBL1Q9H079 304 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 MAGIXQ9H6Y5 334 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 MYOZ2Q9NPC6 264 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 MARK1Q9P0L2 795 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PCYT1BQ9Y5K3 369 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 NFASCO94856 1347 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ATP6V1G1O75348 118 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 ESR1P03372 595 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 FDPSP14324 419 aaKnown RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SUOXP51687 545 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 RBBP4Q09028 425 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 IL27RAQ6UWB1 636 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PPP1R14AQ96A00 147 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 FAM129BQ96TA1 746 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms