RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 JMJD6Q6NYC1 403 aaPredicted RBP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 B4GALNT4Q76KP1 1039 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 PRSS42Q7Z5A4 293 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 ADGRG6Q86SQ4 1221 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 NT5DC3Q86UY8 548 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 PPP1R3BQ86XI6 285 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 APLFQ8IW19 511 aaPredicted RBP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 TMEM151BQ8IW70 566 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 TRIM48Q8IWZ4 208 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 SRRM1Q8IYB3 904 aaKnown RBP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 SLC35F6Q8N357 371 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 TEX26Q8N6G2 289 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 FDCSPQ8NFU4 85 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 SH3KBP1Q96B97 665 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 NRTNQ99748 197 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 MLPHQ9BV36 600 aaPredicted RBP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 NUDT9Q9BW91 350 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 SPATA16Q9BXB7 569 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 CEP41Q9BYV8 373 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 TSGA10Q9BZW7 698 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 POLR1EQ9GZS1 481 aaKnown RBP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 ING2Q9H160 280 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 FAM83DQ9H4H8 585 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 STN1Q9H668 368 aaKnown RBP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 MRPL47Q9HD33 250 aaKnown RBP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 LUC7LQ9NQ29 371 aaKnown RBP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 RBM22Q9NW64 420 aaKnown RBP eCLIP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 TMPRSS11EQ9UL52 423 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 PACSIN2Q9UNF0 486 aaPredicted RBP6.9□□□□□ -1.3
CHEK2-220ENST00000454252 SHOC2Q9UQ13 582 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 PCDHGA6Q9Y5G7 932 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 SCINQ9Y6U3 715 aa6.9□□□□□ -1.3
CHEK2-220ENST00000454252 ABCA12Q86UK0 2595 aa6.9□□□□□ -1.31
CHEK2-220ENST00000454252 ARHGEF17Q96PE2 2063 aaPredicted RBP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 OTOGQ6ZRI0 2925 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 ENO4A6NNW6 628 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 ESPNB1AK53 854 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 AURKAO14965 403 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 ZNF185O15231 689 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 SLC25A14O95258 325 aaPredicted RBP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 LDLRP01130 860 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 CCNYL3P0C7X3 344 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 PRF1P14222 555 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 DESP17661 470 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 NELFEP18615 380 aaKnown RBP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 XRCC1P18887 633 aaPredicted RBP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 POU3F2P20265 443 aaPredicted RBP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 NFKBIAP25963 317 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 PTPN4P29074 926 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 ARL4AP40617 200 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 CD86P42081 329 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 MARCKSL1P49006 195 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 NAP1L1P55209 391 aaKnown RBP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 CDH6P55285 790 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 ITGA1P56199 1179 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 GBE1Q04446 702 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 GALNT2Q10471 571 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 ZBTB17Q13105 803 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 GPS2Q13227 327 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 IL11RAQ14626 422 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 NOMO1Q15155 1222 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 NR6A1Q15406 480 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 SLC6A19Q695T7 634 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 C11orf63Q6NUN7 778 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 DUS1LQ6P1R4 473 aaKnown RBP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 FAM83HQ6ZRV2 1179 aaPredicted RBP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 NLRP8Q86W28 1048 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 BBS5Q8N3I7 341 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 RBMXL3Q8N7X1 1067 aaKnown RBP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 NIPA2Q8N8Q9 360 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 NSMCE1Q8WV22 266 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 KLHL6Q8WZ60 621 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 MAML1Q92585 1016 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 KRT35Q92764 455 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 RANBP9Q96S59 729 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 MAP3K3Q99759 626 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 TLR10Q9BXR5 811 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 CARD9Q9H257 536 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 CHST8Q9H2A9 424 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 PCDH9Q9HC56 1237 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 SLC40A1Q9NP59 571 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 MLXIPLQ9NP71 852 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 ACSS2Q9NR19 701 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 IP6K2Q9UHH9 426 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 PSMD13Q9UNM6 376 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 CFAP20Q9Y6A4 193 aaKnown RBP6.89□□□□□ -1.31
CHEK2-220ENST00000454252 AKAP9Q99996 3911 aa6.89□□□□□ -1.31
CHEK2-220ENST00000454252 FBN2P35556 2912 aa6.88□□□□□ -1.31
CHEK2-220ENST00000454252 PRRC2CQ9Y520 2896 aaKnown RBP6.88□□□□□ -1.31
CHEK2-220ENST00000454252 DOPEY1Q5JWR5 2465 aa6.88□□□□□ -1.31
CHEK2-220ENST00000454252 GOLGA6L9A6NEM1 432 aa6.88□□□□□ -1.31
CHEK2-220ENST00000454252 C21orf140B9A014 251 aa6.88□□□□□ -1.31
CHEK2-220ENST00000454252 F5H423 210 aaPredicted RBP6.88□□□□□ -1.31
CHEK2-220ENST00000454252 KCNK1O00180 336 aa6.88□□□□□ -1.31
CHEK2-220ENST00000454252 CHUKO15111 745 aa6.88□□□□□ -1.31
CHEK2-220ENST00000454252 ZNF500O60304 480 aaPredicted RBP6.88□□□□□ -1.31
CHEK2-220ENST00000454252 PYGLP06737 847 aa6.88□□□□□ -1.31
CHEK2-220ENST00000454252 SLC2A4P14672 509 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms