RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 SIAEQ9HAT2 523 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 SCHIP1Q9P0W5 487 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 XIRP1Q702N8 1843 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 GREB1LQ9C091 1923 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 A8MV72 311 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 E9PAM4 449 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 MITFO75030 526 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 PABPC1P11940 636 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 DDX39BQ13838 428 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 HACD2Q6Y1H2 254 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 SPATA19Q7Z5L4 167 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 TTC30BQ8N4P2 665 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 SLC10A4Q96EP9 437 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 C11orf84Q9BUA3 381 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 SLC25A51Q9H1U9 297 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 FAM118AQ9NWS6 357 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 FAM32AQ9Y421 112 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 EP400Q96L91 3159 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 SCN1AP35498 2009 aa13.71□□□□□ -0.21
UBE2D3-210ENST00000453744 GPR182O15218 404 aa13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 CPSF4O95639 269 aaKnown RBP13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 FYNP06241 537 aa13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 SERPINF2P08697 491 aa13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 AIF1P55008 147 aa13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 HMGCS1Q01581 520 aa13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 RBM48Q5RL73 367 aaKnown RBP13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 C10orf120Q5SQS8 335 aa13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 GLT6D1Q7Z4J2 308 aa13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 PTCD2Q8WV60 388 aaKnown RBP13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 MROH8Q9H579 483 aa13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 C8orf4Q9NR00 106 aa13.71□□□□□ -0.22
UBE2D3-210ENST00000453744 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 SCAMP3O14828 347 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 STAU1O95793 577 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 MYCLP1P12525 358 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 DARSP14868 501 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 CD36P16671 472 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 EDNRBP24530 442 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 IL2P60568 153 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 ILF2Q12905 390 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 SELPLGQ14242 412 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 TRAF7Q6Q0C0 670 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 TOP6BLQ8N6T0 577 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 FAR1Q8WVX9 515 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 ALPK1Q96QP1 1244 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 PARVBQ9HBI1 364 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 MAGEE1Q9HCI5 957 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 VPS4AQ9UN37 437 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 DERAQ9Y315 318 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 PCDHGA11Q9Y5H2 935 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 ELOVL7A1L3X0 281 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 MEIS3P2A8K0S8 358 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 SLC7A4O43246 635 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 TLR5O60602 858 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 NIPSNAP2O75323 286 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 S1PR4O95977 384 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 CD1DP15813 335 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 IL12AP29459 219 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 EPS8Q12929 822 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 TOP3AQ13472 1001 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 PTGR1Q14914 329 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 SIRPB2Q5JXA9 342 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 CACHD1Q5VU97 1274 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 DHRS4L2Q6PKH6 230 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 SIDT2Q8NBJ9 832 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 SLC2A13Q96QE2 648 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 OR52E6Q96RD3 313 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 TUBA1CQ9BQE3 449 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 SDR39U1Q9NRG7 319 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 GDAP2Q9NXN4 497 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 DNAJB9Q9UBS3 223 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 PGAP2Q9UHJ9 254 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 RRN3P2A6NIE6 340 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 EVPLLA8MZ36 301 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 FXYD1O00168 92 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 PIRO00625 290 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 MAFKO60675 156 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 SERPINA1P01009 418 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 FAM163BP0C2L3 166 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 TCF3P15923 654 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 EFNA1P20827 205 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 FSHRP23945 695 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 CRHBPP24387 322 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 UBE3AQ05086 875 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 ANKRD13BQ86YJ7 626 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 LGI2Q8N0V4 545 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 CFAP52Q8N1V2 620 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 TMEM199Q8N511 208 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 SETD9Q8NE22 299 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 SH3RF2Q8TEC5 729 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 RPL3LQ92901 407 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 TSSK3Q96PN8 268 aa13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 OAS3Q9Y6K5 1087 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-210ENST00000453744 A0A1B0GTL3 188 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 FAM155AB1AL88 458 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 FGF10O15520 208 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 AQP1P29972 269 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 LEPRP48357 1165 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 MLLT10P55197 1068 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 TMEM207Q6UWW9 146 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms