RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 FAM71DQ8N9W8 422 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 SPRY4Q9C004 299 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 FBXO8Q9NRD0 319 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 FKBPLQ9UIM3 349 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 WDR37Q9Y2I8 494 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 PCDHB11Q9Y5F2 797 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 B3GALT1Q9Y5Z6 326 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 BAHCC1Q9P281 2608 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 TCRBV7S2A1N4TA0A589 114 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 KLHL33A6NCF5 533 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 OR52A4PA6NMU1 304 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 EFCAB7A8K855 629 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 A8MU76 341 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 STMND1H3BQB6 276 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 LDB2O43679 373 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 METTL18O95568 372 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 DRG2P55039 364 aaKnown RBP19.03■□□□□ 0.64
USP40-207ENST00000450940 SEPT7Q16181 437 aaKnown RBP19.03■□□□□ 0.64
USP40-207ENST00000450940 LONRF2Q1L5Z9 754 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 SNAP47Q5SQN1 464 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 DCAF12Q5T6F0 453 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 FAM83HQ6ZRV2 1179 aaPredicted RBP19.03■□□□□ 0.64
USP40-207ENST00000450940 RTP4Q96DX8 246 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 TEFMQ96QE5 360 aaKnown RBP19.03■□□□□ 0.64
USP40-207ENST00000450940 ASB8Q9H765 288 aa19.03■□□□□ 0.64
USP40-207ENST00000450940 OR2AG2A6NM03 316 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 TOX3O15405 576 aaPredicted RBP19.02■□□□□ 0.64
USP40-207ENST00000450940 SGTAO43765 313 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 C1QL1O75973 258 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 UBXN7O94888 489 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 PTMAP06454 111 aaKnown RBP19.02■□□□□ 0.64
USP40-207ENST00000450940 MSH3P20585 1137 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 HADHAP40939 763 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 HALP42357 657 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 MAPK9P45984 424 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 PPM1FP49593 454 aaPredicted RBP19.02■□□□□ 0.64
USP40-207ENST00000450940 GSDMDP57764 484 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 SRSF6Q13247 344 aaKnown RBP19.02■□□□□ 0.64
USP40-207ENST00000450940 GPR18Q14330 331 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 SPARCL1Q14515 664 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 MANEAQ5SRI9 462 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 METRNLQ641Q3 311 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 ARHGEF18Q6ZSZ5 1173 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 OR13C4Q8NGS5 318 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 NKD1Q969G9 470 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 LRRC45Q96CN5 670 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 CXorf40BQ96DE9 158 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 LINC00615Q96LM1 132 aaPredicted RBP19.02■□□□□ 0.64
USP40-207ENST00000450940 C9orf72Q96LT7 481 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 TSGA10Q9BZW7 698 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 RAB33BQ9H082 229 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 ZMYND15Q9H091 742 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 EPHA6Q9UF33 1036 aa19.02■□□□□ 0.64
USP40-207ENST00000450940 MGAT4DA6NG13 374 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 GOLGA6L6A8MZA4 724 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 PRB1P04280 392 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 PSMA3P25788 255 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 GDF10P55107 478 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 GFERP55789 205 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 NFE2L1Q14494 772 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 RPE65Q16518 533 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 P3H1Q32P28 736 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 BCL7AQ4VC05 210 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 FNBP1LQ5T0N5 605 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 KIAA1614Q5VZ46 1190 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 ANKS6Q68DC2 871 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 XKR5Q6UX68 686 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 FAM129CQ86XR2 697 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 ULK4Q96C45 1275 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 SGF29Q96ES7 293 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 ZPBPQ9BS86 351 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 TMEM121Q9BTD3 319 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 FRMD8P1Q9BZ68 369 aaPredicted RBP19.01■□□□□ 0.63
USP40-207ENST00000450940 LRRC40Q9H9A6 602 aa19.01■□□□□ 0.63
USP40-207ENST00000450940 SIDT1Q9NXL6 827 aaKnown RBP19.01■□□□□ 0.63
USP40-207ENST00000450940 PIEZO2Q9H5I5 2752 aa19■□□□□ 0.63
USP40-207ENST00000450940 H7C0S8 307 aa19■□□□□ 0.63
USP40-207ENST00000450940 PSMD3O43242 534 aa19■□□□□ 0.63
USP40-207ENST00000450940 KRT86O43790 486 aa19■□□□□ 0.63
USP40-207ENST00000450940 AP2A1O95782 977 aa19■□□□□ 0.63
USP40-207ENST00000450940 TYRP1P17643 537 aa19■□□□□ 0.63
USP40-207ENST00000450940 AMD1P17707 334 aa19■□□□□ 0.63
USP40-207ENST00000450940 AKT1P31749 480 aa19■□□□□ 0.63
USP40-207ENST00000450940 STIP1P31948 543 aaKnown RBP19■□□□□ 0.63
USP40-207ENST00000450940 CAPZBP47756 277 aa19■□□□□ 0.63
USP40-207ENST00000450940 OASLQ15646 514 aaKnown RBP19■□□□□ 0.63
USP40-207ENST00000450940 GPR33Q49SQ1 333 aa19■□□□□ 0.63
USP40-207ENST00000450940 TAF1BQ53T94 588 aaPredicted RBP19■□□□□ 0.63
USP40-207ENST00000450940 SNX20Q7Z614 316 aa19■□□□□ 0.63
USP40-207ENST00000450940 VASH2Q86V25 355 aa19■□□□□ 0.63
USP40-207ENST00000450940 NXPE1Q8N323 547 aa19■□□□□ 0.63
USP40-207ENST00000450940 OR2L2Q8NH16 312 aa19■□□□□ 0.63
USP40-207ENST00000450940 HEXDCQ8WVB3 486 aa19■□□□□ 0.63
USP40-207ENST00000450940 PILRAQ9UKJ1 303 aa19■□□□□ 0.63
USP40-207ENST00000450940 ACSL5Q9ULC5 683 aa19■□□□□ 0.63
USP40-207ENST00000450940 COL6A6A6NMZ7 2263 aa19■□□□□ 0.63
USP40-207ENST00000450940 PIKFYVEQ9Y2I7 2098 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 IGLV3-16A0A075B6K0 115 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 TRBV5-4A0A0C4DH59 114 aa18.99■□□□□ 0.63
USP40-207ENST00000450940 CAPN5O15484 640 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms