RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 RFXANKO14593 260 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 STAU1O95793 577 aaKnown RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 RAP2AP10114 183 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 OAZ1P54368 228 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 CDKN2DP55273 166 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 CD47Q08722 323 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 COL9A2Q14055 689 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 SF3B4Q15427 424 aaKnown RBP eCLIP12.26□□□□□ -0.453e-11■■■■■ 37.6
UBE3B-204ENST00000449510 GNASQ5JWF2 1037 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 OSTM1Q86WC4 334 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 SCML4Q8N228 414 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 TTC29Q8NA56 475 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 GPR156Q8NFN8 814 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 RSPH1Q8WYR4 309 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF347Q96SE7 839 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 TTYH2Q9BSA4 534 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 TUBA8Q9NY65 449 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 PCDHGA8Q9Y5G5 932 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 MYH14Q7Z406 1995 aaKnown RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 A0A1W2PP18 115 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 CXCR6O00574 342 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 AXIN1O15169 862 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 ADAM23O75077 832 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 LHX1P48742 406 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 HLCSP50747 726 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 CLCNKBP51801 687 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 SRP54P61011 504 aaKnown RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 SMARCB1Q12824 385 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 CYP27C1Q4G0S4 372 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF57Q68EA5 555 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 PLPPR4Q7Z2D5 763 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 PROSER1Q86XN7 944 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 HMCESQ96FZ2 354 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 SEZ6LQ9BYH1 1024 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 TBC1D14Q9P2M4 693 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 PTBP2Q9UKA9 531 aaKnown RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 PIPSLA2A3N6 862 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 GSRP00390 522 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 MBL2P11226 248 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 PABPC1P11940 636 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 MYF6P23409 242 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 CRATP43155 626 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 RFX4Q33E94 735 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 LINGO4Q6UY18 593 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 TRUB1Q8WWH5 349 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 TMEM203Q969S6 136 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 RTP4Q96DX8 246 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 CGREF1Q99674 301 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 R3HDMLQ9H3Y0 253 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 SCUBE2Q9NQ36 999 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 TMLHEQ9NVH6 421 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ARL15Q9NXU5 204 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 C22orf31O95567 290 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ALDOCP09972 364 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 BMP2P12643 396 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 CDH1P12830 882 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 SHMT2P34897 504 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ALDH3A2P51648 485 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ATP6V0D1P61421 351 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 UNC50Q53HI1 259 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF678Q5SXM1 525 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 GPRIN1Q7Z2K8 1008 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 GPR65Q8IYL9 337 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 LRRC52Q8N7C0 313 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF420Q8TAQ5 688 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 PYCR2Q96C36 320 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 KCNC2Q96PR1 638 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 EBPLQ9BY08 206 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 POLR1EQ9GZS1 481 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 OSBPL2Q9H1P3 480 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 KAT8Q9H7Z6 458 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 RCOR3Q9P2K3 495 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 PADI4Q9UM07 663 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 A0A1B0GUL6 1792 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 CPNE3O75131 537 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 PSIP1O75475 530 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ECI2O75521 394 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 RASAL1O95294 804 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 SLC25A27O95847 323 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 OPN1SWP03999 348 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 FSHRP23945 695 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 SLC26A3P40879 764 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 SLC16A1P53985 500 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 SKIV2LQ15477 1246 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 TARBP2Q15633 366 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 SMN1Q16637 294 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 SPANXN4Q5MJ08 99 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 DDI2Q5TDH0 399 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF549Q6P9A3 640 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 HID1Q8IV36 788 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 TMEM132CQ8N3T6 1108 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ANKFN1Q8N957 763 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 GTPBP3Q969Y2 492 aaKnown RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 RMND5AQ9H871 391 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ATP13A1Q9HD20 1204 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 ERVK13-1Q9NX77 482 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-204ENST00000449510 MRPS7Q9Y2R9 242 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms