RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PTGES3LE9PB15 166 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 OR7A10O76100 309 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 CD4P01730 458 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 IL12RB1P42701 662 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 RIPPLY1Q0D2K3 151 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 ZNF470Q6ECI4 717 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 TCTE3Q8IZS6 198 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 SETD9Q8NE22 299 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 SLC7A6Q92536 515 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 ZNF669Q96BR6 464 aaPredicted RBP18.98■□□□□ 0.63
HMGA1-205ENST00000447654 ATXN7L3BQ96GX2 97 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 DPEP3Q9H4B8 488 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 SLC39A10Q9ULF5 831 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 ACOT9Q9Y305 439 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 HCN4Q9Y3Q4 1203 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 PLXNB2O15031 1838 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 ZCWPW2A0A1B0GU75 182 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 LOC100130705A0A1B0GUX0 176 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 LEUTXA8MZ59 168 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 USP12O75317 370 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 AGXTP21549 392 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 CYP2F1P24903 491 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 ZNF699Q32M78 642 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 GPAT3Q53EU6 434 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 TSTD2Q5T7W7 516 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 SYTL1Q8IYJ3 562 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 DCP1BQ8IZD4 617 aaKnown RBP18.98■□□□□ 0.63
HMGA1-205ENST00000447654 C1orf127Q8N9H9 656 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 OR9I1Q8NGQ6 314 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 LRRC20Q8TCA0 184 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 DMRTB1Q96MA1 342 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 UGT2B28Q9BY64 529 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 AMBRA1Q9C0C7 1298 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 SMOC2Q9H3U7 446 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 SCN3BQ9NY72 215 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 GTF2IRD1Q9UHL9 959 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 MAGEL2Q9UJ55 1249 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.98■□□□□ 0.63
HMGA1-205ENST00000447654 TNFSF13BQ9Y275 285 aa18.98■□□□□ 0.63
HMGA1-205ENST00000447654 LACTBL1A8MY62 500 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 G3V2T6 193 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 NR5A2O00482 541 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 SLC35E2BP0CK96 405 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 MTHFD1P11586 935 aaKnown RBP18.97■□□□□ 0.63
HMGA1-205ENST00000447654 MLLT3P42568 568 aaPredicted RBP18.97■□□□□ 0.63
HMGA1-205ENST00000447654 SLC15A1P46059 708 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 DSTNP60981 165 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 SLC35A2P78381 396 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 POU5F1BQ06416 359 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 CDK5R2Q13319 367 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 TNK1Q13470 666 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 PPP1R3AQ16821 1122 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 VARS2Q5ST30 1063 aaKnown RBP18.97■□□□□ 0.63
HMGA1-205ENST00000447654 FAM102AQ5T9C2 384 aaPredicted RBP18.97■□□□□ 0.63
HMGA1-205ENST00000447654 DENND5AQ6IQ26 1287 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 PRR23BQ6ZRT6 265 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 CENPLQ8N0S6 344 aaPredicted RBP18.97■□□□□ 0.63
HMGA1-205ENST00000447654 APPL2Q8NEU8 664 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 RNF145Q96MT1 663 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 CXCL16Q9H2A7 254 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 NIPAL2Q9H841 368 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 TIGARQ9NQ88 270 aa18.97■□□□□ 0.63
HMGA1-205ENST00000447654 EPN2O95208 641 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 PDGFRAP16234 1089 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 CD6P30203 668 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 CYP2C18P33260 490 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 MAGEA11P43364 429 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 CLK1P49759 484 aaKnown RBP18.96■□□□□ 0.63
HMGA1-205ENST00000447654 LIPEQ05469 1076 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 IKZF1Q13422 519 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 CES5AQ6NT32 575 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 FAM171BQ6P995 826 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 SLC26A9Q7LBE3 791 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 RBM23Q86U06 439 aaKnown RBP18.96■□□□□ 0.63
HMGA1-205ENST00000447654 FAM35AQ86V20 835 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.96■□□□□ 0.63
HMGA1-205ENST00000447654 NLGN4XQ8N0W4 816 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 MIER2Q8N344 545 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 OR10Z1Q8NGY1 313 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 KCTD4Q8WVF5 259 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 RXFP2Q8WXD0 754 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 FCGR1BQ92637 280 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 SLC38A4Q969I6 547 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 GPR78Q96P69 363 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 OSBPL2Q9H1P3 480 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 ACSS2Q9NR19 701 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 BFARQ9NZS9 450 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 USP22Q9UPT9 525 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 CFL2Q9Y281 166 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 CCL15-CCL14A0A0B4J2E2 113 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 FAM92AA1XBS5 289 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 LRIG2O94898 1065 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 STAG3L1P0CL83 205 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 PSMB9P28065 219 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 TGFBR2P37173 567 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 HNF4AP41235 474 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 USP10Q14694 798 aaKnown RBP18.96■□□□□ 0.63
HMGA1-205ENST00000447654 ACAP2Q15057 778 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 CCL15Q16663 113 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 LRRC26Q2I0M4 334 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms