RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CHST15Q7LFX5 561 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 DHRS4Q9BTZ2 278 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 TMEM168Q9H0V1 697 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 SARS2Q9NP81 518 aaKnown RBP17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 GALPQ9UBC7 116 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 CTNNAL1Q9UBT7 734 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 RAPGEFL1Q9UHV5 662 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 GMEB2Q9UKD1 530 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 NFS1Q9Y697 457 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 IKBKGQ9Y6K9 419 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 DGKBQ9Y6T7 804 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 GPR89AB7ZAQ6 455 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 KMOO15229 486 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 POP7O75817 140 aaKnown RBP17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 CELA2BP08218 269 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 ITGA2BP08514 1039 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 GPR89BP0CG08 455 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 ACP5P13686 325 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 LIMK2P53671 638 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 CDKN2DP55273 166 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 IRX4P78413 519 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 TIAL1Q01085 375 aaKnown RBP eCLIP17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 CASP8Q14790 479 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 INSCQ1MX18 579 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 PLA2G2CQ5R387 149 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 HECTD2Q5U5R9 776 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 C11orf96Q7Z7L8 435 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 PIM3Q86V86 326 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 DCLK2Q8N568 766 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 OR2I1PQ8NGU4 316 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 CCL4L1Q8NHW4 92 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZNF514Q96K75 400 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZIM3Q96PE6 472 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 OLFM1Q99784 485 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 CCM2Q9BSQ5 444 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 SLC39A10Q9ULF5 831 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 GPR34Q9UPC5 381 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 KCNK6Q9Y257 313 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 DNAJC16Q9Y2G8 782 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 MED16Q9Y2X0 877 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 HCN4Q9Y3Q4 1203 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 ST14Q9Y5Y6 855 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 FRYLO94915 3013 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 DMDP11532 3685 aa17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 ARID1BQ8NFD5 2236 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC4-203ENST00000447216 WDR87Q6ZQQ6 2873 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 TLDC2A0PJX2 215 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 HMX2A2RU54 273 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 SDC3O75056 442 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 LMNAP02545 664 aaKnown RBP17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 FTH1P02794 183 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 CSF2P04141 144 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 NME1P15531 152 aaKnown RBP17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 CHRM3P20309 590 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 IL9RQ01113 521 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 C1orf61Q13536 156 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 MROH9Q5TGP6 573 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 ADGRD1Q6QNK2 874 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 IQCKQ8N0W5 287 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 LILRA3Q8N6C8 439 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 ELMO1Q92556 727 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 PHOX2BQ99453 314 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 GPR22Q99680 433 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 SLC30A3Q99726 388 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 NUSAP1Q9BXS6 441 aaKnown RBP17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 SLC13A1Q9BZW2 595 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 CAB39LQ9H9S4 337 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 IL21RQ9HBE5 538 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 KLC4Q9NSK0 619 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 PSMC3IPQ9P2W1 217 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 APOBEC3BQ9UH17 382 aaKnown RBP17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 TBK1Q9UHD2 729 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 SLC24A2Q9UI40 661 aa17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 CORO1CQ9ULV4 474 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC4-203ENST00000447216 E5RI56 91 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 H3BMM5 538 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 QSOX1O00391 747 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 KHNYNO15037 678 aaKnown RBP17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 CTSEP14091 401 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 AK4P27144 223 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 CCR7P32248 378 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 SERPINB9P50453 376 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 TAS2R39P59534 338 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 ARHGAP8P85298 464 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 CTBSQ01459 385 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 NFE2L1Q14494 772 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 TMED2Q15363 201 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 SF3A2Q15428 464 aaKnown RBP17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 SHBQ15464 509 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZNF423Q2M1K9 1284 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 HLA-BQ31612 363 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 PRRT3Q5FWE3 981 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 FAM45BPQ6NSW5 357 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 FAM83HQ6ZRV2 1179 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 AMZ2Q86W34 360 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 OXR1Q8N573 874 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 SIDT2Q8NBJ9 832 aaKnown RBP17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 FAM45AQ8TCE6 357 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 LINC00615Q96LM1 132 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 ELF4Q99607 663 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms