RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 DPF3Q92784 378 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 YIPF6Q96EC8 236 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 DMRTB1Q96MA1 342 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 MYOCQ99972 504 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 NDFIP2Q9NV92 336 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 COMMD8Q9NX08 183 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 GPSM3Q9Y4H4 160 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 LTBP4Q8N2S1 1624 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 TNFRSF10AO00220 468 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 AGRPO00253 132 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 ENPP3O14638 875 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 HBP1O60381 514 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 TULP3O75386 442 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 LCKP06239 509 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 MTHFD2P13995 350 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 IGFBP6P24592 240 aaPredicted RBP13.8□□□□□ -0.2
VPS52-212ENST00000445902 ATP6AP1LQ52LC2 224 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 ZNF691Q5VV52 312 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 CCBE1Q6UXH8 406 aaPredicted RBP13.8□□□□□ -0.2
VPS52-212ENST00000445902 CLEC20AQ6ZU45 233 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 PLPPR4Q7Z2D5 763 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 B3GNT8Q7Z7M8 397 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 HID1Q8IV36 788 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 SIX5Q8N196 739 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 APPL2Q8NEU8 664 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 TP53INP1Q96A56 240 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 PYCR2Q96C36 320 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 SLC47A1Q96FL8 570 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 SLC2A13Q96QE2 648 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 FAM49AQ9H0Q0 323 aaPredicted RBP13.8□□□□□ -0.2
VPS52-212ENST00000445902 RIBC2Q9H4K1 309 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 MOV10Q9HCE1 1003 aaKnown RBP13.8□□□□□ -0.2
VPS52-212ENST00000445902 CACNG4Q9UBN1 327 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 PSMD3O43242 534 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 FGF4P08620 206 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 DBTP11182 482 aaKnown RBP13.79□□□□□ -0.2
VPS52-212ENST00000445902 AGTR2P50052 363 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 ITKQ08881 620 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 COQ5Q5HYK3 327 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 BEST2Q8NFU1 509 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 PROX1Q92786 737 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 FCRL5Q96RD9 977 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 NXF3Q9H4D5 531 aaKnown RBP13.79□□□□□ -0.2
VPS52-212ENST00000445902 ACTR8Q9H981 624 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 MRM3Q9HC36 420 aaKnown RBP13.79□□□□□ -0.2
VPS52-212ENST00000445902 ADGRE2Q9UHX3 823 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 DICER1Q9UPY3 1922 aaKnown RBP13.79□□□□□ -0.2
VPS52-212ENST00000445902 EFCAB9A8MZ26 197 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 PRKD3O94806 890 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 CD36P16671 472 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 DNAJB2P25686 324 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 ADRA1AP35348 466 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 MRPS15P82914 257 aaKnown RBP13.79□□□□□ -0.2
VPS52-212ENST00000445902 E2F2Q14209 437 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 FAM187BQ17R55 369 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 CCDC58Q4VC31 144 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 PAQR9Q6ZVX9 377 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 OR10A6Q8NH74 314 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 PROKR1Q8TCW9 393 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 CDK15Q96Q40 435 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 RBM4BQ9BQ04 359 aaKnown RBP13.79□□□□□ -0.2
VPS52-212ENST00000445902 RBM4Q9BWF3 364 aaKnown RBP13.79□□□□□ -0.2
VPS52-212ENST00000445902 DCSTAMPQ9H295 470 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 AS3MTQ9HBK9 375 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 PDGFCQ9NRA1 345 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 DNAJB9Q9UBS3 223 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 NAALAD2Q9Y3Q0 740 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 PCDHB14Q9Y5E9 798 aa13.79□□□□□ -0.2
VPS52-212ENST00000445902 PLXNA1Q9UIW2 1896 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 MICAL3Q7RTP6 2002 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 DYTNA2CJ06 578 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 RGS13O14921 159 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 HPRP00739 348 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 CLK1P49759 484 aaKnown RBP13.78□□□□□ -0.2
VPS52-212ENST00000445902 ST13P50502 369 aaKnown RBP13.78□□□□□ -0.2
VPS52-212ENST00000445902 GEMP55040 296 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 WNT3AP56704 352 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 NRG1Q02297 640 aaPredicted RBP13.78□□□□□ -0.2
VPS52-212ENST00000445902 EPS8Q12929 822 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 TOP3AQ13472 1001 aaPredicted RBP13.78□□□□□ -0.2
VPS52-212ENST00000445902 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 MICU2Q8IYU8 434 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 SVOPQ8N4V2 548 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 ZNF540Q8NDQ6 660 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 REXO4Q9GZR2 422 aaKnown RBP13.78□□□□□ -0.2
VPS52-212ENST00000445902 ADPRHL2Q9NX46 363 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 N6AMT1Q9Y5N5 214 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 DFNA5O60443 496 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 PGLSO95336 258 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 S1PR4O95977 384 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 GGT1P19440 569 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 CXCL9Q07325 125 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 DLEU7Q6UYE1 221 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 NLGN4XQ8N0W4 816 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 METTL4Q8N3J2 472 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 UBE2FQ969M7 185 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 NCLNQ969V3 563 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 NTAN1Q96AB6 310 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 ISG20Q96AZ6 181 aaKnown RBP13.78□□□□□ -0.2
VPS52-212ENST00000445902 BARD1Q99728 777 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms