RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 EPHX4Q8IUS5 362 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 PM20D2Q8IYS1 436 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 TMTC2Q8N394 836 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 GCSAMQ8N6F7 178 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 SPATA20Q8TB22 786 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 SLC38A5Q8WUX1 472 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 DNAAF4Q8WXU2 420 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 IGSF21Q96ID5 467 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 DACH2Q96NX9 599 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 IL17FQ96PD4 163 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 PAFAH2Q99487 392 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 PKP4Q99569 1192 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 TUBA1CQ9BQE3 449 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 SYT17Q9BSW7 474 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 TMX4Q9H1E5 349 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 SLCO5A1Q9H2Y9 848 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 TMEM5Q9Y2B1 443 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 PTRH2Q9Y3E5 179 aaKnown RBP4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 SNX8Q9Y5X2 465 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 ARHGEF5Q12774 1597 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 CHD1O14646 1710 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 PTPRGP23470 1445 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 NCOA1Q15788 1441 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 C9orf84Q5VXU9 1444 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 DENND4BO75064 1496 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 ABCC10Q5T3U5 1492 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 TEX14Q8IWB6 1497 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 SHROOM2Q13796 1616 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 PREX2Q70Z35 1606 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 LNP1A1A4G5 178 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 CTAGE9A4FU28 777 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 C5orf60A6NFR6 353 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 LRRC72A6NJI9 287 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 KRTAP29-1A8MX34 341 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 CLGNO14967 610 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 SLC16A5O15375 505 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 ERAL1O75616 437 aaKnown RBP4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 RSL1D1O76021 490 aaKnown RBP4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 GH2P01242 217 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 CTAGE8P0CG41 777 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 EIF2DP41214 584 aaKnown RBP4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 HSD17B4P51659 736 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 CAPRIN2Q6IMN6 1127 aaKnown RBP4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 UNQ6126/PRO20091Q6UXV3 157 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 SFR1Q86XK3 245 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 GALNT13Q8IUC8 556 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 CTAGE4Q8IX94 777 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 FEM1CQ96JP0 617 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 CEP295NLQ96MC4 621 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 NEUROD6Q96NK8 337 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 NUDT16L1Q9BRJ7 211 aaKnown RBP4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 RAD21L1Q9H4I0 556 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 ARHGEF38Q9NXL2 777 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 RPS6KA6Q9UK32 745 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 PROCRQ9UNN8 238 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 DLGAP4Q9Y2H0 992 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 ZNF711Q9Y462 761 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 PASKQ96RG2 1323 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 DOCK7Q96N67 2140 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 ANKRD30BQ9BXX2 1392 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 ANKRD50Q9ULJ7 1429 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 KIAA1107Q9UPP5 1409 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 ATP10BO94823 1461 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 PZPP20742 1482 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 CCDC141Q6ZP82 1450 aa4.37□□□□□ -1.71
HMGB3P6-201ENST00000444896 KDM5DQ9BY66 1539 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 KAT6BQ8WYB5 2073 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 ZCWPW2A0A1B0GU75 182 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 TMEM189-UBE2V1I3L0A0 370 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 ZNHIT1O43257 154 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 FAM106CPP0CH98 169 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 TSPY4P0CV99 314 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 TSPY10P0CW01 314 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 NR2F1P10589 423 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 AKR1B1P15121 316 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 NMBRP28336 390 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 USP8P40818 1118 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 RAD52P43351 418 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 ZNF132P52740 706 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 UBE2V1Q13404 147 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 BECN1Q14457 450 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 MEP1AQ16819 746 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 TMEM35AQ53FP2 167 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 KLHL22Q53GT1 634 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 STXBP5Q5T5C0 1151 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 ZNF771Q7L3S4 317 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 SLC5A8Q8N695 610 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 CTAGE1Q96RT6 745 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 SLC22A12Q96S37 553 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 DDOQ99489 341 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 HGH1Q9BTY7 390 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 CENPOQ9BU64 300 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 TEX12Q9BXU0 123 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 LRMDAQ9H2I8 198 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 DNAJC18Q9H819 358 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 EVA1AQ9H8M9 152 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 ANKEF1Q9NU02 776 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 TCP11L1Q9NUJ3 509 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms