RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 SARS2Q9NP81 518 aaKnown RBP17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 WASH6PQ9NQA3 447 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 CATSPERZQ9NTU4 200 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 PRR19A6NJB7 356 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 F8W8V4 182 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 QSOX1O00391 747 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 CSO75390 466 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 AP2A2O94973 939 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 TUBB4AP04350 444 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 PAMP19021 973 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 ALDH4A1P30038 563 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 CKAP4Q07065 602 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 NFE2L1Q14494 772 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 CES3Q6UWW8 571 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 ABRAXAS1Q6UWZ7 409 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 PACS1Q6VY07 963 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 MPP5Q8N3R9 675 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 OTUD6BQ8N6M0 293 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 ZNF592Q92610 1267 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 MFSD3Q96ES6 412 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 SLC38A3Q99624 504 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 TRIM51Q9BSJ1 452 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 CPNE7Q9UBL6 633 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 FAM8A1Q9UBU6 413 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 KNTC1P50748 2209 aa17.14■□□□□ 0.33
SMARCAL1-209ENST00000444508 FAM237BA0A1B0GVD1 139 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 KIF2AO00139 706 aaPredicted RBP17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 SMAPO00193 183 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 NTN3O00634 580 aaPredicted RBP17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 PPM1DO15297 605 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 CD3EAPO15446 510 aaKnown RBP17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 SGTAO43765 313 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 VAPBO95292 243 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 VIPP01282 170 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 GSTM1P09488 218 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 PPM1FP49593 454 aaPredicted RBP17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 TTPAP49638 278 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 OR1D5P58170 312 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 GSTM4Q03013 218 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 NR1D2Q14995 579 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 MORF4L2Q15014 288 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 AMZ1Q400G9 498 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 FAM83HQ6ZRV2 1179 aaPredicted RBP17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 MAATS1Q7Z4T9 603 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 CLDN19Q8N6F1 224 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 HM13Q8TCT9 377 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 CXorf40BQ96DE9 158 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 SNF8Q96H20 258 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 CCM2Q9BSQ5 444 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 KCNK4Q9NYG8 393 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 SCHIP1Q9P0W5 487 aaPredicted RBP17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 ACSL5Q9ULC5 683 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 MAD1L1Q9Y6D9 718 aa17.13■□□□□ 0.33
SMARCAL1-209ENST00000444508 ACACBO00763 2458 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 C17orf113A0A1B0GUU1 675 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 A0A1W2PQM1 296 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 EFCAB8A8MWE9 144 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 D6RAR5 112 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 NDC80O14777 642 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 URI1O94763 535 aaPredicted RBP17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 FTH1P02794 183 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 OR56A5P0C7T3 313 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 BRAFP15056 766 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 XRCC1P18887 633 aaPredicted RBP17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 IVDP26440 423 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 MAGEA3P43357 314 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 C2orf54Q08AI8 447 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 ISXQ2M1V0 245 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 MAP9Q49MG5 647 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 DNAJC21Q5F1R6 531 aaKnown RBP17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 METRNLQ641Q3 311 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 KIAA0930Q6ICG6 404 aaPredicted RBP17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 MRNIPQ6NTE8 343 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 ZNF449Q6P9G9 518 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 SDCCAG8Q86SQ7 713 aaPredicted RBP17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 CFAP206Q8IYR0 622 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 ZNF669Q96BR6 464 aaPredicted RBP17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 GRAMD1AQ96CP6 724 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 TRIM31Q9BZY9 425 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 ZMYND15Q9H091 742 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 POT1Q9NUX5 634 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 CDC23Q9UJX2 597 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 PSMD13Q9UNM6 376 aa17.12■□□□□ 0.33
SMARCAL1-209ENST00000444508 UNC13CQ8NB66 2214 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 FAM187AA6NFU0 413 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 OR52A4PA6NMU1 304 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 TMX2-CTNND1H3BSU7 103 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 PFDN6O15212 129 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 CASC3O15234 703 aaKnown RBP17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 B4GAT1O43505 415 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 OR1I1O60431 355 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 CPNE6O95741 557 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 SLC35G4P0C7Q5 338 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 SLC19A1P41440 591 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 UBE2IP63279 158 aaKnown RBP17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 GPLD1P80108 840 aa17.11■□□□□ 0.33
SMARCAL1-209ENST00000444508 SEMA3AQ14563 771 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms