RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 USP30Q70CQ3 517 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 PIWIL4Q7Z3Z4 852 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TRIM74Q86UV6 250 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 CRLF3Q8IUI8 442 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TBC1D3Q8IZP1 549 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 MYO1HQ8N1T3 1032 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 CCNYL1Q8N7R7 359 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 ANKS4BQ8N8V4 417 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 PPP4R1Q8TF05 950 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 HMGB4Q8WW32 186 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 THOC1Q96FV9 657 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 SHDQ96IW2 340 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 SEC16BQ96JE7 1060 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 C7orf26Q96N11 449 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 OSBPL6Q9BZF3 934 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 NPHS2Q9NP85 383 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 POLMQ9NP87 494 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 MBD1Q9UIS9 605 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 DOCK9Q9BZ29 2069 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 A0A1W2PQU0 124 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 SYCE1LA8MT33 242 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 A8MT66 165 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 SUPT3HB4E1H0 165 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 CDC7O00311 574 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 SNX3O60493 162 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 SNNO75324 88 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 SUPT3HO75486 399 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 IPO13O94829 963 aaKnown RBP9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 CDK14O94921 469 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 PAK4O96013 591 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 TPBGLP0DKB5 382 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 CHRNB1P11230 501 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 KCNC1P48547 511 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 NAGLUP54802 743 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 OCRLQ01968 901 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 HSPA14Q0VDF9 509 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 WSCD2Q2TBF2 565 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 ACSBG2Q5FVE4 666 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 CFAP157Q5JU67 520 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 PIGWQ7Z7B1 504 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 NLRP8Q86W28 1048 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 SLC22A9Q8IVM8 553 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 PGBD3Q8N328 593 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 BEND7Q8N7W2 519 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 RASGEF1AQ8N9B8 481 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 PLA2G15Q8NCC3 412 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 CCDC197Q8NCU1 140 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 SKA2Q8WVK7 121 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 KLK6Q92876 244 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 FAM131CQ96AQ9 280 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 PHF21BQ96EK2 531 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 PDLIM5Q96HC4 596 aaKnown RBP9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 C1QTNF7Q9BXJ2 289 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 TRIM55Q9BYV6 548 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZNF395Q9H8N7 513 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 LMAN1LQ9HAT1 526 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 PREBQ9HCU5 417 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 LATS2Q9NRM7 1088 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 FAM8A1Q9UBU6 413 aa9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 CNOT6Q9ULM6 557 aaKnown RBP9.36□□□□□ -0.91
SMPD4P1-203ENST00000443839 TMEM114B3SHH9 223 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 UBXN8O00124 270 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 KPNA5O15131 536 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 RNGTTO60942 597 aaKnown RBP9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 ATG13O75143 517 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 LYPLA1O75608 230 aaPredicted RBP9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 HSPA4LO95757 839 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 GFAPP14136 432 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 GABRG2P18507 467 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 TARSP26639 723 aaKnown RBP9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 CCR7P32248 378 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 DGKEP52429 567 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 ABCE1P61221 599 aaKnown RBP9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 GTF2H3Q13889 308 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 CGB2Q6NT52 195 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 PNCKQ6P2M8 343 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 ADAMTSL4Q6UY14 1074 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 TRIM67Q6ZTA4 783 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 FRA10AC1Q70Z53 315 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 RAB44Q7Z6P3 723 aaPredicted RBP9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 ADAMTSL2Q86TH1 951 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 HEATR4Q86WZ0 1026 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 TRAPPC5Q8IUR0 188 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 SIX5Q8N196 739 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 SYNPOQ8N3V7 929 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 ELMO1Q92556 727 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 FUBP1Q96AE4 644 aaKnown RBP9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 HIC2Q96JB3 615 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 LENG8Q96PV6 779 aaPredicted RBP9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 ATOH8Q96SQ7 321 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 GATA5Q9BWX5 397 aaPredicted RBP9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 C20orf27Q9GZN8 174 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 OR2AG1Q9H205 316 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 TRIM39Q9HCM9 518 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 ACSS2Q9NR19 701 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 NCKIPSDQ9NZQ3 722 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 KLHL42Q9P2K6 505 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 THEGQ9P2T0 379 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 WNT16Q9UBV4 365 aa9.35□□□□□ -0.91
SMPD4P1-203ENST00000443839 MARCOQ9UEW3 520 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms