RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-208	ENST00000443203	RASGEF1A	Q8N9B8	481 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	FBF1	Q8TES7	1133 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	OR1E3	Q8WZA6	343 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	SGF29	Q96ES7	293 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	SCARF2	Q96GP6	870 aa	Predicted RBP	13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	TSSK1B	Q9BXA7	367 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	CCDC68	Q9H2F9	335 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	GAREM1	Q9H706	876 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	PLAC1	Q9HBJ0	212 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	SPAST	Q9UBP0	616 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	LHX6	Q9UPM6	363 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	ADAMTS9	Q9P2N4	1935 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	DOCK9	Q9BZ29	2069 aa		13.91	□□□□□ -0.18
NELFA-208	ENST00000443203	MYLK	Q15746	1914 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	LAMA5	O15230	3695 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203		A0A087WUV0	522 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	CHUK	O15111	745 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	KCNJ13	O60928	360 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	DNAJC6	O75061	913 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	ERLIN1	O75477	346 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	S1PR4	O95977	384 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	VCL	P18206	1134 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	RPS3	P23396	243 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	SLC1A2	P43004	574 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	LEPR	P48357	1165 aa	Known RBP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	BNC1	Q01954	994 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	NAB1	Q13506	487 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	NAA30	Q147X3	362 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	SUZ12	Q15022	739 aa	Known RBP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	KHDC1	Q4VXA5	237 aa	Known RBP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	PYCR3	Q53H96	274 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	PRAMEF14	Q5SWL7	426 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	PTRHD1	Q6GMV3	140 aa	Known RBP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	MICALCL	Q6ZW33	695 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	GALNT7	Q86SF2	657 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	SLC26A11	Q86WA9	606 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	NAXD	Q8IW45	347 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	CTAGE3P	Q8IX95	158 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	FSTL5	Q8N475	847 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	PDXP	Q96GD0	296 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	CAMK1G	Q96NX5	476 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	OR2M4	Q96R27	311 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	CYTH2	Q99418	400 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	BOC	Q9BWV1	1114 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	APOBEC3B	Q9UH17	382 aa	Known RBP	13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	GNPTG	Q9UJJ9	305 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	PCDHB1	Q9Y5F3	818 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	PCDH15	Q96QU1	1955 aa		13.9	□□□□□ -0.18
NELFA-208	ENST00000443203	DSP	P15924	2871 aa	Known RBP	13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	SCN8A	Q9UQD0	1980 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203		A0A1B0GTQ1	180 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	KLHL33	A6NCF5	533 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	NEMP2	A6NFY4	417 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	OR2AG2	A6NM03	316 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203		H3BMM5	538 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	OR1I1	O60431	355 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	FTH1	P02794	183 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	ESR1	P03372	595 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	GSTM1	P09488	218 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	FMO4	P31512	558 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	CD151	P48509	253 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	CCT8	P50990	548 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	CTSC	P53634	463 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	ADAR	P55265	1226 aa	Known RBP	13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	EIF3B	P55884	814 aa	Known RBP	13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	MPP1	Q00013	466 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	B4GALNT1	Q00973	533 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	GSTM4	Q03013	218 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	ILF3	Q12906	894 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	4e-7	■□□□□ 9.9
NELFA-208	ENST00000443203	LRP8	Q14114	963 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	ELOC	Q15369	112 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	KLHL38	Q2WGJ6	581 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	BCL7A	Q4VC05	210 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	CRTC3	Q6UUV7	619 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	CHST15	Q7LFX5	561 aa	Predicted RBP	13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	SDR16C5	Q8N3Y7	309 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	MYRIP	Q8NFW9	859 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	ADAMTS14	Q8WXS8	1223 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	PANX3	Q96QZ0	392 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	CCDC77	Q9BR77	488 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	FUT8	Q9BYC5	575 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	GSDMC	Q9BYG8	508 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	TXLNGY	Q9BZA5	131 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	DOLK	Q9UPQ8	538 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	APOBEC2	Q9Y235	224 aa	Known RBP	13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	CRYL1	Q9Y2S2	319 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	COMMD10	Q9Y6G5	202 aa		13.89	□□□□□ -0.19
NELFA-208	ENST00000443203	FAM159B	A6NKW6	160 aa		13.88	□□□□□ -0.19
NELFA-208	ENST00000443203	RIPK2	O43353	540 aa		13.88	□□□□□ -0.19
NELFA-208	ENST00000443203	POP7	O75817	140 aa	Known RBP	13.88	□□□□□ -0.19
NELFA-208	ENST00000443203	HAUS5	O94927	633 aa		13.88	□□□□□ -0.19
NELFA-208	ENST00000443203	FUCA1	P04066	466 aa		13.88	□□□□□ -0.19
NELFA-208	ENST00000443203	ABHD2	P08910	425 aa		13.88	□□□□□ -0.19
NELFA-208	ENST00000443203	FTH1P19	P0C7X4	201 aa		13.88	□□□□□ -0.19
NELFA-208	ENST00000443203	PKM	P14618	531 aa	Known RBP	13.88	□□□□□ -0.19
NELFA-208	ENST00000443203	PRLHR	P49683	370 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms