RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ARMCX6Q7L4S7 300 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 PRSS48Q7RTY5 328 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 PJA1Q8NG27 643 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 FAR1Q8WVX9 515 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 GLMNQ92990 594 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 VPS33AQ96AX1 596 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 TSPAN17Q96FV3 270 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 NSMCE2Q96MF7 247 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 DACH2Q96NX9 599 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 ASB2Q96Q27 587 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 MBOAT4Q96T53 435 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 TBL1YQ9BQ87 522 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 BTBD2Q9BX70 525 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 ANKHQ9HCJ1 492 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 WDR6Q9NNW5 1121 aaKnown RBP11.77□□□□□ -0.53
LTBR-203ENST00000441074 STARD7Q9NQZ5 370 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 GIMAP2Q9UG22 337 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 FBXW11Q9UKB1 542 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 OGDHLQ9ULD0 1010 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 AAR2Q9Y312 384 aaKnown RBP11.77□□□□□ -0.53
LTBR-203ENST00000441074 V9GYQ6 96 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 TNFRSF10AO00220 468 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 SLC1A7O00341 560 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 PIP5K1BO14986 540 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 CACNG3O60359 315 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 EEDO75530 441 aaKnown RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 UPK1BO75841 260 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 SEC24AO95486 1093 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 RAP2AP10114 183 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 PAMP19021 973 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 CST5P28325 142 aaPredicted RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 NKX2-5P52952 324 aaPredicted RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 NKX3-2P78367 333 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 FUT11Q495W5 492 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 SYPL2Q5VXT5 272 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 DCP2Q8IU60 420 aaKnown RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 ZDHHC13Q8IUH4 622 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 CLIP4Q8N3C7 705 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 NPWQ8N729 165 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 NAT16Q8N8M0 369 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 TWIST2Q8WVJ9 160 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 SDCCAG3Q96C92 435 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 YIPF6Q96EC8 236 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 TSGA13Q96PP4 275 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 CLSTN3Q9BQT9 956 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 ALOXE3Q9BYJ1 711 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 NOL6Q9H6R4 1146 aaKnown RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 NEK6Q9HC98 313 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 SLC2A6Q9UGQ3 507 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 UGT2A1Q9Y4X1 527 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 MAGED1Q9Y5V3 778 aaPredicted RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 GPR45Q9Y5Y3 372 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 FNDC1Q4ZHG4 1894 aaPredicted RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 ASPDHA6ND91 283 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 AZIN1O14977 448 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 KATNA1O75449 491 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 NDST3O95803 873 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 F9P00740 461 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 CCDC159P0C7I6 412 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 HGFP14210 728 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 AGXTP21549 392 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 SOX11P35716 441 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 BRCC3P46736 316 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 MRPL19P49406 292 aaKnown RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 CLCN5P51795 746 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 KCNK10P57789 538 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 HERVK_113P63132 956 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 NFKB2Q00653 900 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 EMX1Q04741 257 aaPredicted RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 GRIK2Q13002 908 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 SLC13A2Q13183 592 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 PAGE3Q5JUK9 113 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 TMEM236Q5W0B7 351 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 GLYATQ6IB77 296 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 KIAA0930Q6ICG6 404 aaPredicted RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 USP43Q70EL4 1123 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 FKBP9P1Q75LS8 142 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 OTOP3Q7RTS5 596 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 HEATR4Q86WZ0 1026 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 LYSMD2Q8IV50 215 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 KIAA2013Q8IYS2 634 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 LGI2Q8N0V4 545 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 PSMA8Q8TAA3 256 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 OSBPL10Q9BXB5 764 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 ERVK-6Q9BXR3 956 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 AMBRA1Q9C0C7 1298 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 TRIT1Q9H3H1 467 aaKnown RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 DSN1Q9H410 356 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 TMEM30AQ9NV96 361 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.76□□□□□ -0.53
LTBR-203ENST00000441074 PAK1IP1Q9NWT1 392 aaPredicted RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 USE1Q9NZ43 259 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 DKK3Q9UBP4 350 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 MAGEL2Q9UJ55 1249 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 DSEQ9UL01 958 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 PTGDR2Q9Y5Y4 395 aa11.76□□□□□ -0.53
LTBR-203ENST00000441074 ZNF638Q14966 1978 aaKnown RBP11.76□□□□□ -0.53
LTBR-203ENST00000441074 FAM172BPA6NC97 362 aa11.75□□□□□ -0.53
LTBR-203ENST00000441074 PTGES3LE9PB15 166 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms