RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PHF13Q86YI8 300 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 WDR49Q8IV35 697 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC44A2Q8IWA5 706 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 BRSK2Q8IWQ3 736 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCDC105Q8IYK2 499 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 LINC01465Q8N7H1 131 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 OR5B17Q8NGF7 314 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 MAFAQ8NHW3 353 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CENPIQ92674 756 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 KRT35Q92764 455 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CDCA5Q96FF9 252 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 SPATA33Q96N06 139 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 FMO2Q99518 471 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM129AQ9BZQ8 928 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 TRIM31Q9BZY9 425 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CENPHQ9H3R5 247 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 SMARCAD1Q9H4L7 1026 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 LRRC19Q9H756 370 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 APOBEC3GQ9HC16 384 aaKnown RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 HOMER3Q9NSC5 361 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZDHHC18Q9NUE0 388 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 POT1Q9NUX5 634 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 GRHL1Q9NZI5 618 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 ADAM22Q9P0K1 906 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 DNMT3BQ9UBC3 853 aaKnown RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 DNAJB11Q9UBS4 358 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 MTRF1LQ9UGC7 380 aaKnown RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CHORDC1Q9UHD1 332 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 RSPH14Q9UHP6 348 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 LCMT1Q9UIC8 334 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 ANAPC7Q9UJX3 599 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CPSF3Q9UKF6 684 aaKnown RBP3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CA14Q9ULX7 337 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 CNTN6Q9UQ52 1028 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 NFS1Q9Y697 457 aa3.52□□□□□ -1.85
HMGB3P11-201ENST00000440127 PHIPQ8WWQ0 1821 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PTPRJQ12913 1337 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 LOXHD1Q8IVV2 1947 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 SRRM3A6NNA2 597 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 H0Y3Z8 333 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 H3BNC9 293 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 EBAG9O00559 213 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 MAGEB2O15479 319 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 DHHO43323 396 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PSTPIP1O43586 416 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 LSM8O95777 96 aaKnown RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 GAS8O95995 478 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ASS1P00966 412 aaKnown RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 GH1P01241 217 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 EDN1P05305 212 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 NUDT17P0C025 328 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 RARGP13631 454 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 NR1D1P20393 614 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 MARK3P27448 753 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ATICP31939 592 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 EPHX2P34913 555 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 MDH1P40925 334 aaKnown RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TNFSF9P41273 254 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 SSR1P43307 286 aaKnown RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 RPL21P46778 160 aaKnown RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF132P52740 706 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PLTPP55058 493 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 MYL6P60660 151 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 DCAF7P61962 342 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCNA1P78396 465 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TFAMQ00059 246 aaKnown RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PSG6Q00889 435 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 CAV1Q03135 178 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 UBE3AQ05086 875 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 CALCOCO2Q13137 446 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PRKG2Q13237 762 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 DRP2Q13474 957 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 MAMLD1Q13495 774 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PDE1CQ14123 709 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 KCNAB1Q14722 419 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLMAPQ14BN4 828 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PPP1R7Q15435 360 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 SIX1Q15475 284 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCNG2Q16589 344 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF750Q32MQ0 723 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 HSDL1Q3SXM5 330 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 KRT71Q3SY84 523 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TRIM60Q495X7 471 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ODF2Q5BJF6 829 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 DNAJC21Q5F1R6 531 aaKnown RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF484Q5JVG2 852 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 C10orf25Q5T742 122 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 MAP3K21Q5TCX8 1036 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ATF7IP2Q5U623 682 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 AWAT2Q6E213 333 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PLEKHA7Q6IQ23 1121 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TTC27Q6P3X3 843 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF517Q6ZMY9 492 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 BBS12Q6ZW61 710 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 NEK10Q6ZWH5 1172 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 MOB2Q70IA6 237 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 MON1BQ7L1V2 547 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 KCTD20Q7Z5Y7 419 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PHLDB2Q86SQ0 1253 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms