RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TRIM54Q9BYV2 358 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 PRRG3Q9BZD7 231 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 ASPSCR1Q9BZE9 553 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 TRIM39Q9HCM9 518 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 SARS2Q9NP81 518 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 AAR2Q9Y312 384 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 EIF3FO00303 357 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 HBP1O60381 514 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 CD1DP15813 335 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 CD6P30203 668 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 PGFP49763 221 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 HTR6P50406 440 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 ISL1P61371 349 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 RGMBQ6NW40 437 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 GADL1Q6ZQY3 521 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 SYVN1Q86TM6 617 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 TAC4Q86UU9 113 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 OR52B6Q8NGF0 335 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 OR13C4Q8NGS5 318 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 ZHX1-C8orf76Q96EF9 292 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 ZFYVE19Q96K21 471 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 RUBCNLQ9H714 662 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 HOXC10Q9NYD6 342 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 VAPAQ9P0L0 249 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 ZNF225Q9UK10 706 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 INTS6Q9UL03 887 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 OR4F21O95013 312 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 ALOX5P09917 674 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 G6PDP11413 515 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 AFF1P51825 1210 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 MRPS15P82914 257 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 ILF2Q12905 390 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 RCAN2Q14206 197 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 PTGR1Q14914 329 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 RBM48Q5RL73 367 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 SNAP47Q5SQN1 464 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 Q6ZPB1 254 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 MMAAQ8IVH4 418 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 C10orf111Q8N326 155 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 TMEM199Q8N511 208 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 PROKR1Q8TCW9 393 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 FAM162AQ96A26 154 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 LGALS12Q96DT0 336 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 TTYH2Q9BSA4 534 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 TNKS2Q9H2K2 1166 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 ADAMTS5Q9UNA0 930 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 EIF3LQ9Y262 564 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 IFT52Q9Y366 437 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 FAM92AA1XBS5 289 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 NPEPPSL1A6NEC2 478 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 MEIS3P2A8K0S8 358 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 BCKDKO14874 412 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 IDH3BO43837 385 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 APBA3O96018 575 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 CLK1P49759 484 aaKnown RBP13.22□□□□□ -0.29
ACTN1-204ENST00000438964 CLK3P49761 638 aaKnown RBP13.22□□□□□ -0.29
ACTN1-204ENST00000438964 MVKQ03426 396 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 CDK5R2Q13319 367 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 SGO1Q5FBB7 561 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 FKBP1CQ5VVH2 108 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 GCNT7Q6ZNI0 430 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 NT5C3BQ969T7 300 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 SPATA17Q96L03 361 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 NECTIN4Q96NY8 510 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 EMILIN2Q9BXX0 1053 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 RMND5AQ9H871 391 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 ACTR8Q9H981 624 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 QPCTLQ9NXS2 382 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 VNN3Q9NY84 501 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 RNF112Q9ULX5 631 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 SNX6Q9UNH7 406 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 PCDHB14Q9Y5E9 798 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 PCDHGA10Q9Y5H3 936 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 PHIPQ8WWQ0 1821 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 SLC12A8A0AV02 714 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 J3KR12 359 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 CCRL2O00421 344 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 ANXA6P08133 673 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 RAP2AP10114 183 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 CD36P16671 472 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 HOXA11P31270 313 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-204ENST00000438964 CLCA4Q14CN2 919 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 AASDHQ4L235 1098 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-204ENST00000438964 PRSS36Q5K4E3 855 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 TTC23Q5W5X9 447 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 KANK2Q63ZY3 851 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 PAQR3Q6TCH7 311 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 CCBE1Q6UXH8 406 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-204ENST00000438964 NEK10Q6ZWH5 1172 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 B3GNT8Q7Z7M8 397 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 SCAMP5Q8TAC9 235 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 DYNC2LI1Q8TCX1 351 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 AFG1LQ8WV93 481 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 SLC47A1Q96FL8 570 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 CDK5RAP1Q96SZ6 601 aaKnown RBP13.22□□□□□ -0.29
ACTN1-204ENST00000438964 CLSTN3Q9BQT9 956 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms