RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SRCP12931 536 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 MCM3P25205 808 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 HNRNPH1P31943 449 aaKnown RBP3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 EPS15P42566 896 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 MC1RQ01726 317 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 NIPAL4Q0D2K0 466 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 ARL16Q0P5N6 197 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 KCTD2Q14681 263 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CRYMQ14894 314 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 OASLQ15646 514 aaKnown RBP3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 NAB2Q15742 525 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CALCRLQ16602 461 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 MEA1Q16626 185 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 USP41Q3LFD5 358 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 PAPPA-AS1Q5QFB9 102 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 C6orf141Q5SZD1 244 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 GFI1BQ5VTD9 330 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CFAP161Q6P656 301 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CLEC4GQ6UXB4 293 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 GSG1LQ6UXU4 331 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 SLC36A4Q6YBV0 504 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CLEC17AQ6ZS10 378 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 TUBA1AQ71U36 451 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 MTSS1LQ765P7 747 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CHST9Q7L1S5 443 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 FASTKD5Q7L8L6 764 aaKnown RBP3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 SMIM29Q86T20 159 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZNF329Q86UD4 541 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 C17orf53Q8N3J3 647 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 SPATA6LQ8N4H0 392 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 SPATA22Q8NHS9 363 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 NEK9Q8TD19 979 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 IGSF8Q969P0 613 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 ELMOD3Q96FG2 381 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 HES6Q96HZ4 224 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 SLC41A2Q96JW4 573 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 INPP4AQ96PE3 977 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CSF3RQ99062 836 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 FAM110AQ9BQ89 295 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 KXD1Q9BQD3 176 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 TUBA1CQ9BQE3 449 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 PCGF1Q9BSM1 259 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CDK19Q9BWU1 502 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 IFIH1Q9BYX4 1025 aaKnown RBP3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 ESRP2Q9H6T0 727 aaKnown RBP3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 SYNCQ9H7C4 482 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 PPP1R3EQ9H7J1 279 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 NOX4Q9NPH5 578 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CNGB3Q9NQW8 809 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 DONSONQ9NYP3 566 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 VPS28Q9UK41 221 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 SNX9Q9Y5X1 595 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 MAU2Q9Y6X3 613 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 ADAMTSL1Q8N6G6 1762 aa3.28□□□□□ -1.89
HMGB3P12-201ENST00000438745 TOGARAM1Q9Y4F4 1720 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 INSRP06213 1382 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 ATXN2Q99700 1313 aaKnown RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 A0A0B4J293 547 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 FRMD3A2A2Y4 597 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 ZNF587BE7ETH6 402 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 VILLO15195 856 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 NDUFS3O75489 264 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 FTCDO95954 541 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 AFPP02771 609 aaKnown RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 LDHCP07864 332 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 UMODP07911 640 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 LINC00271P0C7V0 271 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 CD58P19256 250 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 BDNFP23560 247 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 STX2P32856 288 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 ACTN2P35609 894 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 GARSP41250 739 aaKnown RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 METAP2P50579 478 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 CLNS1AP54105 237 aaKnown RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 CDH8P55286 799 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 SNX16P57768 344 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 NLRP5P59047 1200 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 AMZ1Q400G9 498 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 CDONQ4KMG0 1287 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 RILPL1Q5EBL4 403 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 PPP6R3Q5H9R7 873 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 LRIF1Q5T3J3 769 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 KIAA0930Q6ICG6 404 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 WDR73Q6P4I2 378 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 TMEM154Q6P9G4 183 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 MEX3BQ6ZN04 569 aaKnown RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 PQLC2Q6ZP29 291 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 C9orf139Q6ZV77 190 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 SATL1Q86VE3 508 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 WDR63Q8IWG1 891 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 TEX11Q8IYF3 940 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 SRBD1Q8N5C6 995 aaKnown RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 POC1AQ8NBT0 407 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 SPATA20Q8TB22 786 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 LNX1Q8TBB1 728 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 ARHGEF26Q96DR7 871 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 RRNAD1Q96FB5 475 aaKnown RBP3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 PPP1R13BQ96KQ4 1090 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 HARBI1Q96MB7 349 aa3.27□□□□□ -1.89
HMGB3P12-201ENST00000438745 GUCD1Q96NT3 240 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms