RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 NAPGQ99747 312 aaPredicted RBP13.83□□□□□ -0.2
LINC01088-201ENST00000437737 CARD9Q9H257 536 aa13.83□□□□□ -0.2
LINC01088-201ENST00000437737 ZWILCHQ9H900 591 aa13.83□□□□□ -0.2
LINC01088-201ENST00000437737 AKIRIN1Q9H9L7 192 aaPredicted RBP13.83□□□□□ -0.2
LINC01088-201ENST00000437737 NT5MQ9NPB1 228 aa13.83□□□□□ -0.2
LINC01088-201ENST00000437737 CWC15Q9P013 229 aaKnown RBP13.83□□□□□ -0.2
LINC01088-201ENST00000437737 AMFRQ9UKV5 643 aa13.83□□□□□ -0.2
LINC01088-201ENST00000437737 DNPEPQ9ULA0 475 aa13.83□□□□□ -0.2
LINC01088-201ENST00000437737 CNOT6Q9ULM6 557 aaKnown RBP13.83□□□□□ -0.2
LINC01088-201ENST00000437737 FARSAQ9Y285 508 aaKnown RBP13.83□□□□□ -0.2
LINC01088-201ENST00000437737 C2CD3Q4AC94 2353 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 GRID2IPA4D2P6 1211 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 PDZK1P1A8MUH7 402 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 FADS2P1A8MWK0 482 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 MIF4GDA9UHW6 222 aaKnown RBP13.82□□□□□ -0.2
LINC01088-201ENST00000437737 ZNF185O15231 689 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 FZD6O60353 706 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 MAFKO60675 156 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 RNF8O76064 485 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 CLDN7O95471 211 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 NELFEP18615 380 aaKnown RBP13.82□□□□□ -0.2
LINC01088-201ENST00000437737 SLC19A1P41440 591 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 ZNF135P52742 658 aaPredicted RBP13.82□□□□□ -0.2
LINC01088-201ENST00000437737 DPYSQ14117 519 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 MESDQ14696 234 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 INSCQ1MX18 579 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 ZRANB3Q5FWF4 1079 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 CRTC3Q6UUV7 619 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 TMCO3Q6UWJ1 677 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 SLC34A3Q8N130 599 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 SLC35F6Q8N357 371 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 RBMXL3Q8N7X1 1067 aaKnown RBP13.82□□□□□ -0.2
LINC01088-201ENST00000437737 LRRC57Q8N9N7 239 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 MR1Q95460 341 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 NUDT9Q9BW91 350 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 POT1Q9NUX5 634 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 ZNF624Q9P2J8 865 aaPredicted RBP13.82□□□□□ -0.2
LINC01088-201ENST00000437737 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC01088-201ENST00000437737 ALG6Q9Y672 507 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 CAPN6Q9Y6Q1 641 aa13.82□□□□□ -0.2
LINC01088-201ENST00000437737 PRRC2CQ9Y520 2896 aaKnown RBP13.81□□□□□ -0.2
LINC01088-201ENST00000437737 A6NL46 340 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 H3BRJ5 948 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 CEACAM4O75871 244 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 TMEM63AO94886 807 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 PROSCO94903 275 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 CBX6O95503 412 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 FOLR1P15328 257 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 ZNF8P17098 575 aaPredicted RBP13.81□□□□□ -0.2
LINC01088-201ENST00000437737 LPOP22079 712 aaPredicted RBP13.81□□□□□ -0.2
LINC01088-201ENST00000437737 HCAR3P49019 387 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 ARL4DP49703 201 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 CLCNKAP51800 687 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 CDH6P55285 790 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 ACY1Q03154 408 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 KCNAB1Q14722 419 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 IQCKQ8N0W5 287 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC01088-201ENST00000437737 ARFGAP1Q8N6T3 406 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 UBL4BQ8N7F7 174 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 NIPA2Q8N8Q9 360 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 ZNF592Q92610 1267 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 SNRNP40Q96DI7 357 aaKnown RBP13.81□□□□□ -0.2
LINC01088-201ENST00000437737 FCRL4Q96PJ5 515 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 OR2AG1Q9H205 316 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 FAM83DQ9H4H8 585 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 ARFGAP3Q9NP61 516 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 ASF1BQ9NVP2 202 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 GPR83Q9NYM4 423 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 PKD2L2Q9NZM6 624 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 ATXN10Q9UBB4 475 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 SNX7Q9UNH6 387 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 DNAJC16Q9Y2G8 782 aa13.81□□□□□ -0.2
LINC01088-201ENST00000437737 C1orf232A0A0U1RR37 186 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 ARHGAP10A1A4S6 786 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 CCDC66A2RUB6 948 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 ANKUB1A6NFN9 424 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 SPOPO43791 374 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 CPNE3O75131 537 aaKnown RBP13.8□□□□□ -0.2
LINC01088-201ENST00000437737 EBLN1P0CF75 366 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 AMPD1P23109 780 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 MIPP30301 263 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 ARL4AP40617 200 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 CDK18Q07002 472 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 GPR18Q14330 331 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 RPS6KA1Q15418 735 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 HADHQ16836 314 aaKnown RBP13.8□□□□□ -0.2
LINC01088-201ENST00000437737 ZNF648Q5T619 568 aaPredicted RBP13.8□□□□□ -0.2
LINC01088-201ENST00000437737 HENMT1Q5T8I9 393 aaKnown RBP13.8□□□□□ -0.2
LINC01088-201ENST00000437737 MEI1Q5TIA1 1274 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 BPHLQ86WA6 291 aaPredicted RBP13.8□□□□□ -0.2
LINC01088-201ENST00000437737 PSTKQ8IV42 348 aaKnown RBP13.8□□□□□ -0.2
LINC01088-201ENST00000437737 RAVER1Q8IY67 606 aaKnown RBP13.8□□□□□ -0.2
LINC01088-201ENST00000437737 LPCAT1Q8NF37 534 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 UBXN4Q92575 508 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 MARVELD3Q96A59 401 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 CXorf40BQ96DE9 158 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 WDR24Q96S15 920 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 POLR1EQ9GZS1 481 aaKnown RBP13.8□□□□□ -0.2
LINC01088-201ENST00000437737 WASH6PQ9NQA3 447 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms