RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 ADRB3P13945 408 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 GNAZP19086 355 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 MTHFRP42898 656 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 TGFBIQ15582 683 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 WASHC2DQ5SRD0 308 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 CLEC6AQ6EIG7 209 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 SBSNQ6UWP8 590 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 RAB44Q7Z6P3 723 aaPredicted RBP20.82■□□□□ 0.92
PTPRF-207ENST00000436724 PELI3Q8N2H9 469 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 PLCD3Q8N3E9 789 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 PDLIM5Q96HC4 596 aaKnown RBP20.82■□□□□ 0.92
PTPRF-207ENST00000436724 CXorf56Q9H5V9 222 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 DENND2DQ9H6A0 471 aaPredicted RBP20.82■□□□□ 0.92
PTPRF-207ENST00000436724 EML4Q9HC35 981 aaKnown RBP20.82■□□□□ 0.92
PTPRF-207ENST00000436724 TICRRQ7Z2Z1 1910 aa20.82■□□□□ 0.92
PTPRF-207ENST00000436724 A0A1B0GTL3 188 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 APODP05090 189 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 CALB2P22676 271 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 CCR7P32248 378 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 CPA2P48052 419 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 PSMD8P48556 350 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 GALK1P51570 392 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 SH3BP2P78314 561 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 CHPFQ8IZ52 775 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 SMRP1Q8NCR6 262 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 BTBD10Q9BSF8 475 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 CD274Q9NZQ7 290 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 ADAMTS6Q9UKP5 1117 aa20.81■□□□□ 0.92
PTPRF-207ENST00000436724 IGFBP4P22692 258 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 SEC13P55735 322 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 KRT72Q14CN4 511 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 LSM12Q3MHD2 195 aaKnown RBP20.8■□□□□ 0.92
PTPRF-207ENST00000436724 FAM91A1Q658Y4 838 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 TRAM1L1Q8N609 369 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 TRPC4APQ8TEL6 797 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 EZH1Q92800 747 aaPredicted RBP20.8■□□□□ 0.92
PTPRF-207ENST00000436724 AP2M1Q96CW1 435 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 ZNF570Q96NI8 536 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 SMOXQ9NWM0 555 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 VTI1BQ9UEU0 232 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 SUN2Q9UH99 717 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 STON1Q9Y6Q2 735 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 H3BQ06 376 aaPredicted RBP20.8■□□□□ 0.92
PTPRF-207ENST00000436724 AREL1O15033 823 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 CDK14O94921 469 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 ATP1B2P14415 290 aaPredicted RBP20.8■□□□□ 0.92
PTPRF-207ENST00000436724 DGKAP23743 735 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 RGS4P49798 205 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 GALNT1Q10472 559 aaPredicted RBP20.8■□□□□ 0.92
PTPRF-207ENST00000436724 C18orf21Q32NC0 220 aaPredicted RBP20.8■□□□□ 0.92
PTPRF-207ENST00000436724 MYO1HQ8N1T3 1032 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 BEND7Q8N7W2 519 aaPredicted RBP20.8■□□□□ 0.92
PTPRF-207ENST00000436724 TRMOQ9BU70 441 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 ZSCAN5AQ9BUG6 496 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 SEMA4BQ9NPR2 832 aaPredicted RBP20.8■□□□□ 0.92
PTPRF-207ENST00000436724 LMCD1Q9NZU5 365 aa20.8■□□□□ 0.92
PTPRF-207ENST00000436724 SLCO1B7G3V0H7 640 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 WNT9AO14904 365 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 GSC2O15499 205 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 KLK8O60259 260 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 MMP20O60882 483 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 HK2P52789 917 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 HTR4Q13639 388 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 AAK1Q2M2I8 961 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 ZNF284Q2VY69 593 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 TXNDC11Q6PKC3 985 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 FRA10AC1Q70Z53 315 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 ZNF513Q8N8E2 541 aaPredicted RBP20.79■□□□□ 0.92
PTPRF-207ENST00000436724 KCNV2Q8TDN2 545 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 DLG3Q92796 817 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 RSRC1Q96IZ7 334 aaKnown RBP20.79■□□□□ 0.92
PTPRF-207ENST00000436724 DYRK4Q9NR20 520 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 GEMIN8Q9NWZ8 242 aaKnown RBP20.79■□□□□ 0.92
PTPRF-207ENST00000436724 G3BP2Q9UN86 482 aaKnown RBP20.79■□□□□ 0.92
PTPRF-207ENST00000436724 TRAF6Q9Y4K3 522 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 TRIOBPQ9H2D6 2365 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 OR2AG2A6NM03 316 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 INPP4BO15327 924 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 DCXO43602 365 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 SNX2O60749 519 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 SNUPNO95149 360 aaKnown RBP20.79■□□□□ 0.92
PTPRF-207ENST00000436724 OR56A5P0C7T3 313 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 ESRRAP11474 423 aaPredicted RBP20.79■□□□□ 0.92
PTPRF-207ENST00000436724 BTKQ06187 659 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 PPP1R3AQ16821 1122 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 TMEM198Q66K66 360 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 CYHR1Q6ZMK1 362 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 RINLQ6ZS11 566 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 ERN2Q76MJ5 926 aaKnown RBP20.79■□□□□ 0.92
PTPRF-207ENST00000436724 ENDOVQ8N8Q3 282 aaKnown RBP20.79■□□□□ 0.92
PTPRF-207ENST00000436724 DCUN1D1Q96GG9 259 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 PPP1R16AQ96I34 528 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 COQ10AQ96MF6 247 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 PANX3Q96QZ0 392 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 ZBTB26Q9HCK0 441 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 MID1IP1Q9NPA3 183 aa20.79■□□□□ 0.92
PTPRF-207ENST00000436724 K7ESM1 405 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 SGTAO43765 313 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 ENTPD5O75356 428 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 GUCA1CO95843 209 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms