RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 LRRC4CQ9HCJ2 640 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 BPIFA1Q9NP55 256 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 VPS4AQ9UN37 437 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 SPO11Q9Y5K1 396 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 NBPF19A0A087WUL8 3843 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 TLCD2A6NGC4 264 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 C3orf70A6NLC5 250 aaPredicted RBP14.57□□□□□ -0.08
PRKDC-203ENST00000432581 TTLL8A6PVC2 850 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 AURKAO14965 403 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 PMPCBO75439 489 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 TMEM253P0C7T8 217 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 HNRNPH3P31942 346 aaKnown RBP14.57□□□□□ -0.08
PRKDC-203ENST00000432581 TNNT3P45378 269 aaPredicted RBP14.57□□□□□ -0.08
PRKDC-203ENST00000432581 RPS15P62841 145 aaKnown RBP14.57□□□□□ -0.08
PRKDC-203ENST00000432581 MESDQ14696 234 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 PLCL1Q15111 1095 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 RPE65Q16518 533 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 ODF2Q5BJF6 829 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 DNTTIP2Q5QJE6 756 aaKnown RBP14.57□□□□□ -0.08
PRKDC-203ENST00000432581 LDLRAP1Q5SW96 308 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 CAVIN1Q6NZI2 390 aaKnown RBP14.57□□□□□ -0.08
PRKDC-203ENST00000432581 BZW1Q7L1Q6 419 aaKnown RBP14.57□□□□□ -0.08
PRKDC-203ENST00000432581 SYVN1Q86TM6 617 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 LURAP1LQ8IV03 231 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 GALNT11Q8NCW6 608 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 OR8K5Q8NH50 307 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 ZNF514Q96K75 400 aaPredicted RBP14.57□□□□□ -0.08
PRKDC-203ENST00000432581 PACSIN1Q9BY11 444 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 IL26Q9NPH9 171 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 FGF21Q9NSA1 209 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 FAM153AQ9UHL3 310 aa14.57□□□□□ -0.08
PRKDC-203ENST00000432581 PCDHGA9Q9Y5G4 932 aaKnown RBP14.57□□□□□ -0.08
PRKDC-203ENST00000432581 DNMT3AQ9Y6K1 912 aaPredicted RBP14.57□□□□□ -0.08
PRKDC-203ENST00000432581 TEX15Q9BXT5 2789 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 UBA6A0AVT1 1052 aaPredicted RBP14.56□□□□□ -0.08
PRKDC-203ENST00000432581 CPNE3O75131 537 aaKnown RBP14.56□□□□□ -0.08
PRKDC-203ENST00000432581 POP7O75817 140 aaKnown RBP14.56□□□□□ -0.08
PRKDC-203ENST00000432581 DNAJB5O75953 348 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 PDGFAP04085 211 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 SPAM1P38567 509 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 ARHGAP25P42331 645 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 PGDP52209 483 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 PPP1CAP62136 330 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 TUBB4BP68371 445 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 HSD11B2P80365 405 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 TUBB2AQ13885 445 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 KCNAB1Q14722 419 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 C4orf17Q53FE4 359 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 FAM182AQ5T1J6 154 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 LRRC38Q5VT99 294 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 NPNTQ6UXI9 565 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 RFX6Q8HWS3 928 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 CARFQ8N187 725 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 D2HGDHQ8N465 521 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 DDHD1Q8NEL9 900 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 GPR150Q8NGU9 434 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 CPT1CQ8TCG5 803 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 TEKT5Q96M29 485 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 MAP3K3Q99759 626 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 SLC25A23Q9BV35 468 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 TUBB2BQ9BVA1 445 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 TRIM55Q9BYV6 548 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 HACD3Q9P035 362 aa14.56□□□□□ -0.08
PRKDC-203ENST00000432581 LOC285095A0A1B0GVY8 99 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 OR5K3A6NET4 321 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 EPOP01588 193 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 KRT1P04264 644 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 EBLN1P0CF75 366 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 PTPN3P26045 913 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 NR2C2P49116 596 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 ITGA9Q13797 1035 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 PPP2R5EQ16537 467 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 FHL5Q5TD97 284 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 CAPRIN2Q6IMN6 1127 aaKnown RBP14.55□□□□□ -0.08
PRKDC-203ENST00000432581 FAM199XQ6PEV8 388 aaPredicted RBP14.55□□□□□ -0.08
PRKDC-203ENST00000432581 LUZP1Q86V48 1076 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 OOSP2Q86WS3 158 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 TTC30BQ8N4P2 665 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 RASGEF1AQ8N9B8 481 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 ZFPM2Q8WW38 1151 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 ANP32EQ9BTT0 268 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 DEF6Q9H4E7 631 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 ACSS2Q9NR19 701 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 UBP1Q9NZI7 540 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 IL17CQ9P0M4 197 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 PSMD13Q9UNM6 376 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 FARSAQ9Y285 508 aaKnown RBP14.55□□□□□ -0.08
PRKDC-203ENST00000432581 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.55□□□□□ -0.08
PRKDC-203ENST00000432581 UNC79Q9P2D8 2635 aa14.55□□□□□ -0.08
PRKDC-203ENST00000432581 GLYATL1P3A0A0U1RQE8 302 aa14.54□□□□□ -0.08
PRKDC-203ENST00000432581 KLHL33A6NCF5 533 aa14.54□□□□□ -0.08
PRKDC-203ENST00000432581 SCRG1O75711 98 aa14.54□□□□□ -0.08
PRKDC-203ENST00000432581 AGFG2O95081 481 aa14.54□□□□□ -0.08
PRKDC-203ENST00000432581 ZBTB11O95625 1053 aaPredicted RBP14.54□□□□□ -0.08
PRKDC-203ENST00000432581 MTHFD1P11586 935 aaKnown RBP14.54□□□□□ -0.08
PRKDC-203ENST00000432581 LPOP22079 712 aaPredicted RBP14.54□□□□□ -0.08
PRKDC-203ENST00000432581 UQCRFS1P47985 274 aa14.54□□□□□ -0.08
PRKDC-203ENST00000432581 CTSCP53634 463 aa14.54□□□□□ -0.08
PRKDC-203ENST00000432581 WNT3AP56704 352 aa14.54□□□□□ -0.08
PRKDC-203ENST00000432581 RPS18P62269 152 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms