RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 GIMAP7Q8NHV1 300 aa17.98■□□□□ 0.47
HMGN1-206ENST00000431390 INPP5DQ92835 1189 aa17.98■□□□□ 0.47
HMGN1-206ENST00000431390 FAM136AQ96C01 138 aa17.98■□□□□ 0.47
HMGN1-206ENST00000431390 SLC17A9Q9BYT1 436 aa17.98■□□□□ 0.47
HMGN1-206ENST00000431390 DERL2Q9GZP9 239 aa17.98■□□□□ 0.47
HMGN1-206ENST00000431390 SPATS2LQ9NUQ6 558 aaKnown RBP17.98■□□□□ 0.47
HMGN1-206ENST00000431390 GALPQ9UBC7 116 aa17.98■□□□□ 0.47
HMGN1-206ENST00000431390 EBF1Q9UH73 591 aa17.98■□□□□ 0.47
HMGN1-206ENST00000431390 PCDHGA2Q9Y5H1 932 aa17.98■□□□□ 0.47
HMGN1-206ENST00000431390 LRRC72A6NJI9 287 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 INPP4BO15327 924 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 RBP1P09455 135 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 CD1DP15813 335 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 TMEM115Q12893 351 aaPredicted RBP17.97■□□□□ 0.47
HMGN1-206ENST00000431390 NUMA1Q14980 2115 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 TSSK4Q6SA08 328 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 RGS9BPQ6ZS82 235 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 FAM124AQ86V42 546 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 SPEM1Q8N4L4 309 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 PLA2G15Q8NCC3 412 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 LKAAEAR1Q8TD35 194 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 PDLIM5Q96HC4 596 aaKnown RBP17.97■□□□□ 0.47
HMGN1-206ENST00000431390 COX14Q96I36 57 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 HIC2Q96JB3 615 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 SCYL1Q96KG9 808 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 SLC30A3Q99726 388 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 MRPL57Q9BQC6 102 aaKnown RBP17.97■□□□□ 0.47
HMGN1-206ENST00000431390 IER2Q9BTL4 223 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 MRPL46Q9H2W6 279 aaKnown RBP17.97■□□□□ 0.47
HMGN1-206ENST00000431390 TRIM39Q9HCM9 518 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 CD93Q9NPY3 652 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 COPG2Q9UBF2 871 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 NCOR2Q9Y618 2525 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 DOCK9Q9BZ29 2069 aa17.97■□□□□ 0.47
HMGN1-206ENST00000431390 CCDC189A1A4V9 331 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 MTX2O75431 263 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 TRIM16O95361 564 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 PAK4O96013 591 aaPredicted RBP17.96■□□□□ 0.47
HMGN1-206ENST00000431390 PCCBP05166 539 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 BPGMP07738 259 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 OXTRP30559 389 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 ACSL1P33121 698 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 MAGEA9P43362 315 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 GLRBP48167 497 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 IL2P60568 153 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 ATP6V0D1P61421 351 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 IRX4P78413 519 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 TTLL9Q3SXZ7 439 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 TECRLQ5HYJ1 363 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 ANO7Q6IWH7 933 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 TRIM42Q8IWZ5 723 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 TMEM151AQ8N4L1 468 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 ZBTB44Q8NCP5 570 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 CNTNAP3BQ96NU0 1288 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 CNTNAP3Q9BZ76 1288 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 SARS2Q9NP81 518 aaKnown RBP17.96■□□□□ 0.47
HMGN1-206ENST00000431390 C2orf42Q9NWW7 574 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 XPR1Q9UBH6 696 aa17.96■□□□□ 0.47
HMGN1-206ENST00000431390 TARM1B6A8C7 271 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 C10orf142B7Z368 130 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 EIF3FO00303 357 aaPredicted RBP17.96■□□□□ 0.46
HMGN1-206ENST00000431390 KPNA5O15131 536 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 SGTAO43765 313 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 VEGFDO43915 354 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 ZNF217O75362 1048 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 FTH1P02794 183 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 CPA3P15088 417 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 TRIM23P36406 574 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 PRLHRP49683 370 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 PPP2CBP62714 309 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 PPP2CAP67775 309 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 GABPB1Q06547 395 aaPredicted RBP17.96■□□□□ 0.46
HMGN1-206ENST00000431390 PCLAFQ15004 111 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 IRF4Q15306 451 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 DET1Q7L5Y6 550 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 OTOAQ7RTW8 1153 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 HEATR4Q86WZ0 1026 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 NUDCD3Q8IVD9 361 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 SPATA6LQ8N4H0 392 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 ZBTB2Q8N680 514 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 RASGEF1AQ8N9B8 481 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 DENND6BQ8NEG7 585 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 RAB3IL1Q8TBN0 382 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 LRRC8CQ8TDW0 803 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 LENG8Q96PV6 779 aaPredicted RBP17.96■□□□□ 0.46
HMGN1-206ENST00000431390 TEX101Q9BY14 249 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 TFB2MQ9H5Q4 396 aaKnown RBP17.96■□□□□ 0.46
HMGN1-206ENST00000431390 ZSCAN32Q9NX65 697 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 SIRPGQ9P1W8 387 aa17.96■□□□□ 0.46
HMGN1-206ENST00000431390 WDR91A4D1P6 747 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 TK2O00142 265 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 LILRB5O75023 590 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 SEMA4FO95754 770 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 TSPAN12O95859 305 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 SBK3P0C264 359 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 CBSLP0DN79 551 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 ITGB6P18564 788 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 TFEBP19484 476 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 DGKAP23743 735 aa17.95■□□□□ 0.46
HMGN1-206ENST00000431390 CBSP35520 551 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms