RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 CPNE3O75131 537 aaKnown RBP5.32□□□□□ -1.56
PTPN4-203ENST00000430976 GNSP15586 552 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 RXRBP28702 533 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 ALDH3B1P43353 468 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 VSX2P58304 361 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-203ENST00000430976 MAGOHP61326 146 aaKnown RBP5.32□□□□□ -1.56
PTPN4-203ENST00000430976 PTPN11Q06124 597 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-203ENST00000430976 FMR1Q06787 632 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPN4-203ENST00000430976 FSTL1Q12841 308 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 MMRN1Q13201 1228 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 SNAPC2Q13487 334 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 GIT2Q14161 759 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 KNOP1Q1ED39 458 aaKnown RBP5.32□□□□□ -1.56
PTPN4-203ENST00000430976 YIF1BQ5BJH7 314 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 TRIM61Q5EBN2 209 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 KCTD9Q7L273 389 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 CAMKMTQ7Z624 323 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 L3MBTL4Q8NA19 623 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 BHLHE23Q8NDY6 225 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 OR13C2Q8NGS9 318 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 SEMA4DQ92854 862 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 COPS5Q92905 334 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 MAGOHBQ96A72 148 aaKnown RBP5.32□□□□□ -1.56
PTPN4-203ENST00000430976 FAF2Q96CS3 445 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 CCDC51Q96ER9 411 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 TOE1Q96GM8 510 aaKnown RBP5.32□□□□□ -1.56
PTPN4-203ENST00000430976 C5orf30Q96GV9 206 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 MS4A14Q96JA4 679 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 DMRTA2Q96SC8 542 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 NT5C1AQ9BXI3 368 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 ZDHHC5Q9C0B5 715 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 CLPBQ9H078 707 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 ARHGEF4Q9NR80 690 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 EXD2Q9NVH0 621 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 CACNG4Q9UBN1 327 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 HEMK1Q9Y5R4 338 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-203ENST00000430976 ATP23Q9Y6H3 246 aa5.32□□□□□ -1.56
PTPN4-203ENST00000430976 A0A0A6YYH2 397 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 A6NJ64 397 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 RNF13O43567 381 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 MFAP3LO75121 409 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SLC22A3O75751 556 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 GSTP1P09211 210 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 OR52Z1P0C646 297 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TXKP42681 527 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CARSP49589 748 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PRKAA2P54646 552 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ILF2Q12905 390 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PLA2G7Q13093 441 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF268Q14587 947 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CHI3L2Q15782 390 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 AP5B1Q2VPB7 878 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SEL1L3Q68CR1 1132 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TYW3Q6IPR3 259 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TGIF2LXQ8IUE1 241 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SLITRK4Q8IW52 837 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ZFPM1Q8IX07 1006 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SGTBQ96EQ0 304 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 RAB17Q9H0T7 212 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PPA2Q9H2U2 334 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 MID1IP1Q9NPA3 183 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TMEM140Q9NV12 185 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF221Q9UK13 617 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 RAB23Q9ULC3 237 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SLC12A7Q9Y666 1083 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CHD5Q8TDI0 1954 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 NPIPA5A0A0B4J1W7 369 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 C2orf71A6NGG8 1288 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PDZK1P1A8MUH7 402 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 E9PI62 339 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 NPIPA5E9PKD4 350 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 NEDD8-MDP1E9PL57 170 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 POC1B-GALNT4F8VUJ3 575 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 NPIPA3F8WFD2 350 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 OR10H3O60404 316 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 XYLBO75191 536 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 RSL1D1O76021 490 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PDGFAP04085 211 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CALCBP10092 127 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CYP2C8P10632 490 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 THRAP10827 490 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CD36P16671 472 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 OXTRP30559 389 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 VIPR1P32241 457 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 FDFT1P37268 417 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CDH6P55285 790 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 FOLH1Q04609 750 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TFCP2Q12800 502 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 LTB4RQ15722 352 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PFKFB4Q16877 469 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 C2orf76Q3KRA6 126 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 DPCR1Q3MIW9 517 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ACER2Q5QJU3 275 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF468Q5VIY5 522 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 KLHDC10Q6PID8 442 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 IZUMO2Q6UXV1 221 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 FMR1NBQ8N0W7 255 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PYROXD2Q8N2H3 581 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PAPD5Q8NDF8 572 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms