RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 OR6C1Q96RD1 312 aa16.76■□□□□ 0.27
TRIM39-209ENST00000428728 GBA3Q9H227 469 aa16.76■□□□□ 0.27
TRIM39-209ENST00000428728 ADNPQ9H2P0 1102 aa16.76■□□□□ 0.27
TRIM39-209ENST00000428728 TRIT1Q9H3H1 467 aaKnown RBP16.76■□□□□ 0.27
TRIM39-209ENST00000428728 ZNF768Q9H5H4 540 aaKnown RBP16.76■□□□□ 0.27
TRIM39-209ENST00000428728 WASH6PQ9NQA3 447 aa16.76■□□□□ 0.27
TRIM39-209ENST00000428728 MRPS18BQ9Y676 258 aaKnown RBP16.76■□□□□ 0.27
TRIM39-209ENST00000428728 TLN1Q9Y490 2541 aaKnown RBP16.76■□□□□ 0.27
TRIM39-209ENST00000428728 SPTA1P02549 2419 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 GAPDHSO14556 408 aaPredicted RBP16.75■□□□□ 0.27
TRIM39-209ENST00000428728 POP7O75817 140 aaKnown RBP16.75■□□□□ 0.27
TRIM39-209ENST00000428728 WISP1O95388 367 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 LCA5LO95447 670 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 AGTP01019 485 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 RBL1P28749 1068 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 OAS2P29728 719 aaKnown RBP16.75■□□□□ 0.27
TRIM39-209ENST00000428728 STAT5AP42229 794 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 PPP1CAP62136 330 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 KCNC4Q03721 635 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 ITGA9Q13797 1035 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 NFE2L1Q14494 772 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 SPA17Q15506 151 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 ATP1A1-AS1Q5TC04 95 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 C16orf46Q6P387 395 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 ATG14Q6ZNE5 492 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 FAM83HQ6ZRV2 1179 aaPredicted RBP16.75■□□□□ 0.27
TRIM39-209ENST00000428728 DET1Q7L5Y6 550 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 PTRH1Q86Y79 214 aaKnown RBP16.75■□□□□ 0.27
TRIM39-209ENST00000428728 RASGRP3Q8IV61 690 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 RBM12BQ8IXT5 1001 aaKnown RBP16.75■□□□□ 0.27
TRIM39-209ENST00000428728 ESX1Q8N693 406 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 APOL2Q9BQE5 337 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 EFHD1Q9BUP0 239 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 FAM8A1Q9UBU6 413 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 TRHDEQ9UKU6 1024 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 ARL5AQ9Y689 179 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 RPS6KL1Q9Y6S9 549 aa16.75■□□□□ 0.27
TRIM39-209ENST00000428728 APOC4-APOC2K7ER74 178 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 STX7O15400 261 aaKnown RBP16.74■□□□□ 0.27
TRIM39-209ENST00000428728 KIAA0754O94854 1291 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 PRAMEF1O95521 474 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 APOC2P02655 101 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 CYLC1P35663 651 aaPredicted RBP16.74■□□□□ 0.27
TRIM39-209ENST00000428728 GEMP55040 296 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 OTUD4Q01804 1114 aaKnown RBP16.74■□□□□ 0.27
TRIM39-209ENST00000428728 OLIG2Q13516 323 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 PLCL1Q15111 1095 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 FNBP1LQ5T0N5 605 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 TMEM220Q6QAJ8 160 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 SARM1Q6SZW1 724 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 PRSS42Q7Z5A4 293 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 BEND7Q8N7W2 519 aaPredicted RBP16.74■□□□□ 0.27
TRIM39-209ENST00000428728 GALNT6Q8NCL4 622 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 NAT14Q8WUY8 206 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 STAMBPL1Q96FJ0 436 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 ZDHHC12Q96GR4 267 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 FAM118BQ9BPY3 351 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 GORASP1Q9BQQ3 440 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 LUC7LQ9NQ29 371 aaKnown RBP16.74■□□□□ 0.27
TRIM39-209ENST00000428728 IMP3Q9NV31 184 aaKnown RBP16.74■□□□□ 0.27
TRIM39-209ENST00000428728 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.74■□□□□ 0.27
TRIM39-209ENST00000428728 LNPEPQ9UIQ6 1025 aa16.74■□□□□ 0.27
TRIM39-209ENST00000428728 CFAP20Q9Y6A4 193 aaKnown RBP16.74■□□□□ 0.27
TRIM39-209ENST00000428728 TERTO14746 1132 aaKnown RBP16.73■□□□□ 0.27
TRIM39-209ENST00000428728 TOX3O15405 576 aaPredicted RBP16.73■□□□□ 0.27
TRIM39-209ENST00000428728 SUV39H1O43463 412 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 NDUFA10O95299 355 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 TCN2P20062 427 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 MSH3P20585 1137 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 PSMB4P28070 264 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 CTNNA1P35221 906 aaKnown RBP16.73■□□□□ 0.27
TRIM39-209ENST00000428728 DLSTP36957 453 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 DMPKQ09013 629 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 XRCC4Q13426 336 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 MAP7Q14244 749 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 RPE65Q16518 533 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 DEFB109BQ30KR1 87 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 ITPRIPL1Q6GPH6 555 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 DUS1LQ6P1R4 473 aaKnown RBP16.73■□□□□ 0.27
TRIM39-209ENST00000428728 C6orf15Q6UXA7 325 aaPredicted RBP16.73■□□□□ 0.27
TRIM39-209ENST00000428728 CCDC170Q8IYT3 715 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 ACTL9Q8TC94 416 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 CROTQ9UKG9 612 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 BSNQ9UPA5 3926 aa16.73■□□□□ 0.27
TRIM39-209ENST00000428728 SOWAHDA6NJG2 315 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 PJA2O43164 708 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 KCNJ13O60928 360 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 ANXA9O76027 345 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 LPOP22079 712 aaPredicted RBP16.72■□□□□ 0.27
TRIM39-209ENST00000428728 FECHP22830 423 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 F8A1P23610 371 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 CTNNA2P26232 953 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 CSRP3P50461 194 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 MC1RQ01726 317 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 IL11RAQ14626 422 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 KCNAB1Q14722 419 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 LONRF2Q1L5Z9 754 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 CDKL3Q8IVW4 592 aaPredicted RBP16.72■□□□□ 0.27
TRIM39-209ENST00000428728 OR4K2Q8NGD2 314 aa16.72■□□□□ 0.27
TRIM39-209ENST00000428728 ZNF398Q8TD17 642 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms