RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 RPE65Q16518 533 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 TEX44Q53QW1 395 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 AGAP9Q5VTM2 703 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 FAM69BQ5VUD6 431 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 CPZQ66K79 652 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 PDPK2PQ6A1A2 396 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 WASH2PQ6VEQ5 465 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 VSIG1Q86XK7 387 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 SIDT2Q8NBJ9 832 aaKnown RBP16.21■□□□□ 0.19
VARS-216ENST00000428445 PPM1MQ96MI6 270 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 OLFM3Q96PB7 478 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 ACTL8Q9H568 366 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 IL26Q9NPH9 171 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 WASH6PQ9NQA3 447 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 RAD18Q9NS91 495 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 NFKBIL1Q9UBC1 381 aaPredicted RBP16.21■□□□□ 0.19
VARS-216ENST00000428445 KCND3Q9UK17 655 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 ICE1Q9Y2F5 2266 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 SYCE3A1L190 88 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 GOLGA6L3A6NEY3 463 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 OR2AG2A6NM03 316 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 KRT1P04264 644 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 GNLYP22749 145 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 FECHP22830 423 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 ARCN1P48444 511 aaKnown RBP16.2■□□□□ 0.18
VARS-216ENST00000428445 CD97P48960 835 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 PMS2P54278 862 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 PDK1Q15118 436 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 ASTE1Q2TB18 679 aaPredicted RBP16.2■□□□□ 0.18
VARS-216ENST00000428445 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.2■□□□□ 0.18
VARS-216ENST00000428445 PRAMEF17Q5VTA0 474 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 DUS1LQ6P1R4 473 aaKnown RBP16.2■□□□□ 0.18
VARS-216ENST00000428445 TMEM220Q6QAJ8 160 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 FAM151BQ6UXP7 276 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 BEND7Q8N7W2 519 aaPredicted RBP16.2■□□□□ 0.18
VARS-216ENST00000428445 VPS35Q96QK1 796 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 EPHA6Q9UF33 1036 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 RARRES3Q9UL19 164 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 PCDHGA6Q9Y5G7 932 aa16.2■□□□□ 0.18
VARS-216ENST00000428445 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.2■□□□□ 0.18
VARS-216ENST00000428445 A0A0A6YYK5 440 aaPredicted RBP16.19■□□□□ 0.18
VARS-216ENST00000428445 CCL11P51671 97 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 WNT3AP56704 352 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 SEMA5AQ13591 1074 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 IL10RAQ13651 578 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 GTF2H3Q13889 308 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 GPR19Q15760 415 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 SLC18A3Q16572 532 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 NADK2Q4G0N4 442 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 SIRPB2Q5JXA9 342 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 LCN10Q6JVE6 187 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 CCDC70Q6NSX1 233 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 KDELC1Q6UW63 502 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 MFSD7Q6UXD7 560 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 DET1Q7L5Y6 550 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 AMZ2Q86W34 360 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 SLC41A2Q96JW4 573 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 TEKT5Q96M29 485 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 TTC25Q96NG3 672 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 SRPK1Q96SB4 655 aaKnown RBP16.19■□□□□ 0.18
VARS-216ENST00000428445 XPO4Q9C0E2 1151 aaKnown RBP16.19■□□□□ 0.18
VARS-216ENST00000428445 PDE7BQ9NP56 450 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 FAM8A1Q9UBU6 413 aa16.19■□□□□ 0.18
VARS-216ENST00000428445 ARGFXA6NJG6 315 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 TTLL8A6PVC2 850 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 GOLGA6L19H0YKK7 550 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 PPP1R12AO14974 1030 aaPredicted RBP16.18■□□□□ 0.18
VARS-216ENST00000428445 TPM3P06753 285 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 TMEM253P0C7T8 217 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 PECAM1P16284 738 aaPredicted RBP16.18■□□□□ 0.18
VARS-216ENST00000428445 NFKB1P19838 968 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 HALP42357 657 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 ADCY2Q08462 1091 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 WASHC5Q12768 1159 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 PLCL1Q15111 1095 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 C4orf17Q53FE4 359 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 KAZNQ674X7 775 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 MICALCLQ6ZW33 695 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 ATCAYQ86WG3 371 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 SLC38A9Q8NBW4 561 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 SPDYE1Q8NFV5 336 aaPredicted RBP16.18■□□□□ 0.18
VARS-216ENST00000428445 INSM2Q96T92 566 aaPredicted RBP16.18■□□□□ 0.18
VARS-216ENST00000428445 CHP1Q99653 195 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 NRTNQ99748 197 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 RAB33BQ9H082 229 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 LRRC4CQ9HCJ2 640 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 FGF21Q9NSA1 209 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 SPTLC3Q9NUV7 552 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 IMP3Q9NV31 184 aaKnown RBP16.18■□□□□ 0.18
VARS-216ENST00000428445 IL17CQ9P0M4 197 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 SEMA5BQ9P283 1151 aa16.18■□□□□ 0.18
VARS-216ENST00000428445 LOC285095A0A1B0GVY8 99 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 GAPDHSO14556 408 aaPredicted RBP16.17■□□□□ 0.18
VARS-216ENST00000428445 MT-ND3P03897 115 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 ZFXP17010 805 aaPredicted RBP16.17■□□□□ 0.18
VARS-216ENST00000428445 VCLP18206 1134 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 PTPN4P29074 926 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 HMGCLP35914 325 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 ARHGAP25P42331 645 aa16.17■□□□□ 0.18
VARS-216ENST00000428445 LAMB3Q13751 1172 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms