RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 ERLIN1O75477 346 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 SYF2O95926 243 aaKnown RBP6.91□□□□□ -1.3
CDC7-203ENST00000428239 FOXN2P32314 431 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 PREPP48147 710 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 ARHGAP8P85298 464 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 XIAPP98170 497 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 ITIH4Q14624 930 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 TTLL9Q3SXZ7 439 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 KHDC1Q4VXA5 237 aaKnown RBP6.91□□□□□ -1.3
CDC7-203ENST00000428239 SNAP47Q5SQN1 464 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 KCTD16Q68DU8 428 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 FOXR1Q6PIV2 292 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 CNSTQ6PJW8 725 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 TAOK1Q7L7X3 1001 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 DDHD1Q8NEL9 900 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 C1orf216Q8TAB5 229 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 NETO1Q8TDF5 533 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 PEX13Q92968 403 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 ALKBH8Q96BT7 664 aaKnown RBP6.91□□□□□ -1.3
CDC7-203ENST00000428239 C12orf66Q96MD2 445 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 TSNARE1Q96NA8 513 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 RUFY1Q96T51 708 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 RMI1Q9H9A7 625 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 PRDM8Q9NQV8 689 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 TRNAU1APQ9NX07 287 aaKnown RBP6.91□□□□□ -1.3
CDC7-203ENST00000428239 KLHL3Q9UH77 587 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 KLF15Q9UIH9 416 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 ASF1AQ9Y294 204 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 PROB1E7EW31 1015 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 NIPSNAP2O75323 286 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 AMD1P17707 334 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 PMS2P54278 862 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 ABRQ12979 859 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 PRKG2Q13237 762 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 AGERQ15109 404 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 RSPO4Q2I0M5 234 aaPredicted RBP6.91□□□□□ -1.3
CDC7-203ENST00000428239 PLA2G2CQ5R387 149 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 ARMC6Q6NXE6 501 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 NAXDQ8IW45 347 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 PATE1Q8WXA2 126 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 VPS35Q96QK1 796 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 CDC42EP4Q9H3Q1 356 aaKnown RBP6.91□□□□□ -1.3
CDC7-203ENST00000428239 MRM3Q9HC36 420 aaKnown RBP6.91□□□□□ -1.3
CDC7-203ENST00000428239 CIDEBQ9UHD4 219 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 SLC39A10Q9ULF5 831 aa6.91□□□□□ -1.3
CDC7-203ENST00000428239 ZW10O43264 779 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 SIGLEC6O43699 453 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 SOD1P00441 154 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 IVLP07476 585 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 PKMP14618 531 aaKnown RBP6.9□□□□□ -1.3
CDC7-203ENST00000428239 SLC2A4P14672 509 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 MAP4P27816 1152 aaKnown RBP6.9□□□□□ -1.3
CDC7-203ENST00000428239 PLA2G5P39877 138 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 MSH2P43246 934 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 DUSP3P51452 185 aaPredicted RBP6.9□□□□□ -1.3
CDC7-203ENST00000428239 MAZP56270 477 aaKnown RBP6.9□□□□□ -1.3
CDC7-203ENST00000428239 BNC1Q01954 994 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 DNAJC3Q13217 504 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 LRP8Q14114 963 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 USP10Q14694 798 aaKnown RBP6.9□□□□□ -1.3
CDC7-203ENST00000428239 PYCR3Q53H96 274 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 ZDHHC24Q6UX98 284 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 TMEM135Q86UB9 458 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 NLRP8Q86W28 1048 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 OR10G6Q8NH81 332 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 MAPK15Q8TD08 544 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 ASZ1Q8WWH4 475 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 FERD3LQ96RJ6 166 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 CYTH2Q99418 400 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 CCM2Q9BSQ5 444 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 HGH1Q9BTY7 390 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 ERVMER34-1Q9H9K5 563 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 SMYD2Q9NRG4 433 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 TREX1Q9NSU2 369 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 SLC17A4Q9Y2C5 497 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 BTBD3Q9Y2F9 522 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 TEX264Q9Y6I9 313 aa6.9□□□□□ -1.3
CDC7-203ENST00000428239 SPAARA0A1B0GVQ0 90 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 TCRBV9S1A1TA0A576 114 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 MGAT4DA6NG13 374 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 OR52A4PA6NMU1 304 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 LMO7DNF2Z398 122 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 H3BMM5 538 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 SPAG6O75602 509 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 OGNP20774 298 aaKnown RBP6.9□□□□□ -1.31
CDC7-203ENST00000428239 SLCO1A2P46721 670 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 RGS4P49798 205 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 KBTBD12Q3ZCT8 623 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 LRRC6Q86X45 466 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 CILP2Q8IUL8 1156 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 SPDYE1Q8NFV5 336 aaPredicted RBP6.9□□□□□ -1.31
CDC7-203ENST00000428239 EXT2Q93063 718 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 TCF12Q99081 682 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 WWP1Q9H0M0 922 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 RRAGDQ9NQL2 400 aaPredicted RBP6.9□□□□□ -1.31
CDC7-203ENST00000428239 NSMCE4AQ9NXX6 385 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 TAS2R13Q9NYV9 303 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 TBK1Q9UHD2 729 aa6.9□□□□□ -1.31
CDC7-203ENST00000428239 CNOT6Q9ULM6 557 aaKnown RBP6.9□□□□□ -1.31
CDC7-203ENST00000428239 PADI4Q9UM07 663 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms