RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 KIFC1Q9BW19 673 aa17.7■□□□□ 0.42
HERC3-205ENST00000426683 CCDC86Q9H6F5 360 aaKnown RBP17.7■□□□□ 0.42
HERC3-205ENST00000426683 TREX1Q9NSU2 369 aa17.7■□□□□ 0.42
HERC3-205ENST00000426683 ZNF624Q9P2J8 865 aaPredicted RBP17.7■□□□□ 0.42
HERC3-205ENST00000426683 FAM8A1Q9UBU6 413 aa17.7■□□□□ 0.42
HERC3-205ENST00000426683 ASIC3Q9UHC3 531 aa17.7■□□□□ 0.42
HERC3-205ENST00000426683 WDR37Q9Y2I8 494 aa17.7■□□□□ 0.42
HERC3-205ENST00000426683 AK5Q9Y6K8 562 aa17.7■□□□□ 0.42
HERC3-205ENST00000426683 ARHGEF17Q96PE2 2063 aaPredicted RBP17.7■□□□□ 0.42
HERC3-205ENST00000426683 IGHV1OR21-1A0A087WYE8 117 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 KLHL33A6NCF5 533 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 OR52A4PA6NMU1 304 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 CPNE6O95741 557 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 VIPP01282 170 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 NMBRP28336 390 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 CD1CP29017 333 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 SLC19A1P41440 591 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 HALP42357 657 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 NSG1P42857 185 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 PPM1FP49593 454 aaPredicted RBP17.69■□□□□ 0.42
HERC3-205ENST00000426683 INHBCP55103 352 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 CLCA4Q14CN2 919 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 RTP5Q14D33 572 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 FASTKD1Q53R41 847 aaKnown RBP17.69■□□□□ 0.42
HERC3-205ENST00000426683 NKAIN2Q5VXU1 208 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 SYT10Q6XYQ8 523 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 USP53Q70EK8 1073 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 PPIL6Q8IXY8 311 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 MPP5Q8N3R9 675 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 CLDN19Q8N6F1 224 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 NAT8LQ8N9F0 302 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 KDF1Q8NAX2 398 aaPredicted RBP17.69■□□□□ 0.42
HERC3-205ENST00000426683 RUNDC3BQ96NL0 473 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.69■□□□□ 0.42
HERC3-205ENST00000426683 FOXP3Q9BZS1 431 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 RDH14Q9HBH5 336 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 MRM3Q9HC36 420 aaKnown RBP17.69■□□□□ 0.42
HERC3-205ENST00000426683 XAB2Q9HCS7 855 aaKnown RBP17.69■□□□□ 0.42
HERC3-205ENST00000426683 SOX13Q9UN79 622 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 PSMD13Q9UNM6 376 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 RP1P56715 2156 aa17.69■□□□□ 0.42
HERC3-205ENST00000426683 CCDC188H7C350 402 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 CAPNS1P04632 268 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 MPOP05164 745 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 MLNP12872 115 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 DR1Q01658 176 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 SEMA3AQ14563 771 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 CLPPQ16740 277 aaPredicted RBP17.68■□□□□ 0.42
HERC3-205ENST00000426683 RNASEH2BQ5TBB1 312 aaKnown RBP17.68■□□□□ 0.42
HERC3-205ENST00000426683 LYPLAL1Q5VWZ2 237 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 METRNLQ641Q3 311 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 CASC4Q6P4E1 433 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 CES3Q6UWW8 571 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 TMPRSS9Q7Z410 1059 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 PIM3Q86V86 326 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 CFAP206Q8IYR0 622 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 COL27A1Q8IZC6 1860 aaPredicted RBP17.68■□□□□ 0.42
HERC3-205ENST00000426683 OR10G6Q8NH81 332 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 HM13Q8TCT9 377 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 CXorf40BQ96DE9 158 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 MFSD3Q96ES6 412 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 AHCYL2Q96HN2 611 aaKnown RBP17.68■□□□□ 0.42
HERC3-205ENST00000426683 SGSM3Q96HU1 749 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 TMEM74Q96NL1 305 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 SERPINB12Q96P63 405 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 TTC1Q99614 292 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 NUDT22Q9BRQ3 303 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 ZMYND15Q9H091 742 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 EPB41L5Q9HCM4 733 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 CATSPERZQ9NTU4 200 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 POT1Q9NUX5 634 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 ANAPC5Q9UJX4 755 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 PRSS21Q9Y6M0 314 aa17.68■□□□□ 0.42
HERC3-205ENST00000426683 TMX2-CTNND1H3BSU7 103 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 DNALI1O14645 258 aaPredicted RBP17.67■□□□□ 0.42
HERC3-205ENST00000426683 AP2A2O94973 939 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 CCKBRP32239 447 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 MAPK9P45984 424 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 GABREP78334 506 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 GPLD1P80108 840 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 RPE65Q16518 533 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 ST3GAL2Q16842 350 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 C3orf38Q5JPI3 329 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 XKR5Q6UX68 686 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 PACS1Q6VY07 963 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 CERS6Q6ZMG9 384 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 SYDE1Q6ZW31 735 aaPredicted RBP17.67■□□□□ 0.42
HERC3-205ENST00000426683 SLITRK4Q8IW52 837 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 CCM2Q9BSQ5 444 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 TBC1D10AQ9BXI6 508 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 STRADBQ9C0K7 418 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 WWP1Q9H0M0 922 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 VPS37BQ9H9H4 285 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 ACSL5Q9ULC5 683 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 SATB2Q9UPW6 733 aa17.67■□□□□ 0.42
HERC3-205ENST00000426683 ZFC3H1O60293 1989 aaKnown RBP17.66■□□□□ 0.42
HERC3-205ENST00000426683 CCDC187A0A096LP49 1063 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 PRAMEF33A0A0G2JMD5 474 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 C17orf113A0A1B0GUU1 675 aa17.66■□□□□ 0.42
HERC3-205ENST00000426683 A0A1W2PNU3 283 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms