RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 OXNAD1Q96HP4 312 aaPredicted RBP12.76□□□□□ -0.37
VRK3-203ENST00000424804 C9orf72Q96LT7 481 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 FCRL5Q96RD9 977 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 APOL2Q9BQE5 337 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 GBA3Q9H227 469 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 BPIFA1Q9NP55 256 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 R3HDM2Q9Y2K5 976 aaKnown RBP12.76□□□□□ -0.37
VRK3-203ENST00000424804 HEMK1Q9Y5R4 338 aaPredicted RBP12.76□□□□□ -0.37
VRK3-203ENST00000424804 OR5K4A6NMS3 321 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 ZNF891A8MT65 544 aaPredicted RBP12.75□□□□□ -0.37
VRK3-203ENST00000424804 MTX2O75431 263 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 STK17BO94768 372 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 SLC25A14O95258 325 aaPredicted RBP12.75□□□□□ -0.37
VRK3-203ENST00000424804 ZNF7P17097 686 aaPredicted RBP12.75□□□□□ -0.37
VRK3-203ENST00000424804 GEMP55040 296 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 KCNAB2Q13303 367 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 MPP3Q13368 585 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 OLIG2Q13516 323 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 SLC14A2Q15849 920 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 SIRPB2Q5JXA9 342 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 ATP1A1-AS1Q5TC04 95 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 MEI1Q5TIA1 1274 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 CEACAM20Q6UY09 585 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 ARHGEF18Q6ZSZ5 1173 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 TMEM26Q6ZUK4 368 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 PTRH1Q86Y79 214 aaKnown RBP12.75□□□□□ -0.37
VRK3-203ENST00000424804 FAM71DQ8N9W8 422 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 ATG4AQ8WYN0 398 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 MRGPRX2Q96LB1 330 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 ZPBPQ9BS86 351 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 SPATA16Q9BXB7 569 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.75□□□□□ -0.37
VRK3-203ENST00000424804 KLHL3Q9UH77 587 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 TUBD1Q9UJT1 453 aa12.75□□□□□ -0.37
VRK3-203ENST00000424804 MRPS18BQ9Y676 258 aaKnown RBP12.75□□□□□ -0.37
VRK3-203ENST00000424804 LOC285095A0A1B0GVY8 99 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 GPR89AB7ZAQ6 455 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 CAPN5O15484 640 aaPredicted RBP12.74□□□□□ -0.37
VRK3-203ENST00000424804 BUD23O43709 281 aaKnown RBP12.74□□□□□ -0.37
VRK3-203ENST00000424804 KIF1CO43896 1103 aaKnown RBP12.74□□□□□ -0.37
VRK3-203ENST00000424804 ANXA9O76027 345 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 AGTP01019 485 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 FURINP09958 794 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 GPR89BP0CG08 455 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 STAT5AP42229 794 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 MAPK9P45984 424 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 LEPRP48357 1165 aaKnown RBP12.74□□□□□ -0.37
VRK3-203ENST00000424804 SH3BP2P78314 561 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 TLE1Q04724 770 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 SNX1Q13596 522 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 MAP7Q14244 749 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 SPARCL1Q14515 664 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 SKIDA1Q1XH10 827 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 CRTC2Q53ET0 693 aaPredicted RBP12.74□□□□□ -0.37
VRK3-203ENST00000424804 ZNF569Q5MCW4 686 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 PDPK2PQ6A1A2 396 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 CRTC3Q6UUV7 619 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 WASH2PQ6VEQ5 465 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 GLT6D1Q7Z4J2 308 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 TTC30BQ8N4P2 665 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 C1orf54Q8WWF1 131 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 RNF31Q96EP0 1072 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 SPATA13Q96N96 652 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 TIMM29Q9BSF4 260 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 TMEM121Q9BTD3 319 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 ZSCAN5AQ9BUG6 496 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 EPB41L1Q9H4G0 881 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 SLC40A1Q9NP59 571 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 WASH6PQ9NQA3 447 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 SEMA5BQ9P283 1151 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 WDR37Q9Y2I8 494 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 LRRK2Q5S007 2527 aa12.74□□□□□ -0.37
VRK3-203ENST00000424804 GAPDHSO14556 408 aaPredicted RBP12.73□□□□□ -0.37
VRK3-203ENST00000424804 POLR1CO15160 346 aaPredicted RBP12.73□□□□□ -0.37
VRK3-203ENST00000424804 KMOO15229 486 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 SLC2A4P14672 509 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 TYRP1P17643 537 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 HLA-DPA1P20036 260 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 CXCR5P32302 372 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 GDF10P55107 478 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 SRSF1Q07955 248 aaKnown RBP eCLIP12.73□□□□□ -0.37
VRK3-203ENST00000424804 CDC20Q12834 499 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 KLF1Q13351 362 aaPredicted RBP12.73□□□□□ -0.37
VRK3-203ENST00000424804 SLC1A5Q15758 541 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 PLA2G4EQ3MJ16 856 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 ATP13A5Q4VNC0 1218 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 AGAP9Q5VTM2 703 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 LRRTM4Q86VH4 590 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 SLC13A5Q86YT5 568 aaPredicted RBP12.73□□□□□ -0.37
VRK3-203ENST00000424804 PLXDC1Q8IUK5 500 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 TRIM58Q8NG06 486 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 KLHL6Q8WZ60 621 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 RSC1A1Q92681 617 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 LRRC45Q96CN5 670 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 CATSPER2Q96P56 530 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 VPS35Q96QK1 796 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 EPN3Q9H201 632 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 GPN2Q9H9Y4 310 aaPredicted RBP12.73□□□□□ -0.37
VRK3-203ENST00000424804 ZNF148Q9UQR1 794 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms