RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 EIF3BP55884 814 aaKnown RBP16.73■□□□□ 0.27
COL7A1-202ENST00000422991 CTBSQ01459 385 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 BNIP3Q12983 259 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 ELOCQ15369 112 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 TCEA2Q15560 299 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 PLA2G4EQ3MJ16 856 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 KBTBD12Q3ZCT8 623 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 CHST15Q7LFX5 561 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-202ENST00000422991 ERMP1Q7Z2K6 904 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 SLC26A11Q86WA9 606 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 NRROSQ86YC3 692 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 BEND7Q8N7W2 519 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-202ENST00000422991 GPBAR1Q8TDU6 330 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 LMX1AQ8TE12 382 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 SAP25Q8TEE9 199 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 CDKL2Q92772 493 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 LINC00615Q96LM1 132 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-202ENST00000422991 BIRC8Q96P09 236 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 ACSS3Q9H6R3 686 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 UCKL1Q9NWZ5 548 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 NSMCE4AQ9NXX6 385 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 SLC23A2Q9UGH3 650 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 GNPTGQ9UJJ9 305 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 CDV3Q9UKY7 258 aaKnown RBP16.73■□□□□ 0.27
COL7A1-202ENST00000422991 PLEKHM1Q9Y4G2 1056 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 PCDHB1Q9Y5F3 818 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 DNMT3AQ9Y6K1 912 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-202ENST00000422991 DNAH14Q0VDD8 3507 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 PRR19A6NJB7 356 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 LMO7DNF2Z398 122 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 RIPK2O43353 540 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 PIAS1O75925 651 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 HAUS5O94927 633 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 ESR1P03372 595 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 OR56A5P0C7T3 313 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 ILF3Q12906 894 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL7A1-202ENST00000422991 NAB1Q13506 487 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 C1orf61Q13536 156 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 EFTUD2Q15029 972 aaKnown RBP eCLIP16.72■□□□□ 0.276e-7■■■■■ 29.5
COL7A1-202ENST00000422991 INSCQ1MX18 579 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 CTSL3PQ5NE16 218 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 EMBQ6PCB8 327 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 CNSTQ6PJW8 725 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 CCL4L1Q8NHW4 92 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 NETO1Q8TDF5 533 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 GSDMCQ9BYG8 508 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 EPB41L4BQ9H329 900 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 RABGEF1Q9UJ41 708 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 CRYL1Q9Y2S2 319 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 PCDHGB2Q9Y5G2 931 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 CSNK1G3Q9Y6M4 447 aa16.72■□□□□ 0.27
COL7A1-202ENST00000422991 F8W8V4 182 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 POP7O75817 140 aaKnown RBP16.71■□□□□ 0.27
COL7A1-202ENST00000422991 AHSGP02765 367 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 FTH1P02794 183 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 GSTM1P09488 218 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 AK4P27144 223 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-202ENST00000422991 PBLDP30039 288 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-202ENST00000422991 FMO4P31512 558 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 CD151P48509 253 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 CLCNKAP51800 687 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 GSTM4Q03013 218 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 DMPKQ09013 629 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 ZNF658BQ4V348 819 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-202ENST00000422991 PTRHD1Q6GMV3 140 aaKnown RBP16.71■□□□□ 0.27
COL7A1-202ENST00000422991 ZNF549Q6P9A3 640 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 AMZ2Q86W34 360 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 GATAD2AQ86YP4 633 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 SDR16C5Q8N3Y7 309 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 SLC25A45Q8N413 288 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 LKAAEAR1Q8TD35 194 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 CAVIN3Q969G5 261 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 CYTH2Q99418 400 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 CCM2Q9BSQ5 444 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 MCMBPQ9BTE3 642 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 KLC4Q9NSK0 619 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 GULP1Q9UBP9 304 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 KCNK6Q9Y257 313 aa16.71■□□□□ 0.27
COL7A1-202ENST00000422991 A0A087WUV0 522 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-202ENST00000422991 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-202ENST00000422991 KLHL33A6NCF5 533 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 MGAT4DA6NG13 374 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 H3BMM5 538 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 CTIFO43310 598 aaKnown RBP16.7■□□□□ 0.26
COL7A1-202ENST00000422991 GDF9O60383 454 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 KCNJ13O60928 360 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 PKMP14618 531 aaKnown RBP16.7■□□□□ 0.26
COL7A1-202ENST00000422991 VCLP18206 1134 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 ACTR1BP42025 376 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 ABCG1P45844 678 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 ACTR1AP61163 376 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 FOXK2Q01167 660 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 SLC30A9Q6PML9 568 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 XKR5Q6UX68 686 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 DGLUCYQ7Z3D6 616 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 STRA8Q7Z7C7 330 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 TAF8Q7Z7C8 310 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 GKN2Q86XP6 184 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 CTAGE3PQ8IX95 158 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 PPM1NQ8N819 430 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms