RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 CDH4P55283 916 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 ABRAXAS2Q15018 415 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 AP5B1Q2VPB7 878 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 TMEM259Q4ZIN3 620 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 GPR107Q5VW38 600 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 ANKRD34AQ69YU3 496 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 PRMT9Q6P2P2 845 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 GPR141Q7Z602 305 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 AQP12AQ8IXF9 295 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 FAM126BQ8IXS8 530 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 LKAAEAR1Q8TD35 194 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.59□□□□□ -0.23
CTCFL-203ENST00000422109 ZUFSPQ96AP4 578 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 SCLYQ96I15 445 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 SLC52A3Q9NQ40 469 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 STARD7Q9NQZ5 370 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 HACD3Q9P035 362 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 LEF1Q9UJU2 399 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-203ENST00000422109 ANGPTL3Q9Y5C1 460 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 KRT87PA6NCN2 255 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 H3BNC9 293 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 MAGEB3O15480 346 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 STC2O76061 302 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 PENKP01210 267 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-203ENST00000422109 ZFP36L2P47974 494 aaKnown RBP13.59□□□□□ -0.23
CTCFL-203ENST00000422109 TTPAP49638 278 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 CCT8P50990 548 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 BNIP2Q12982 314 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 RCAN2Q14206 197 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 HECTD3Q5T447 861 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 LCN8Q6JVE9 175 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 HS3ST5Q8IZT8 346 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 TMEM199Q8N511 208 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 SKA2Q8WVK7 121 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-203ENST00000422109 EID2BQ96D98 161 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 UHRF1Q96T88 793 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-203ENST00000422109 C9orf16Q9BUW7 83 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 THUMPD3Q9BV44 507 aaKnown RBP13.59□□□□□ -0.23
CTCFL-203ENST00000422109 NAA50Q9GZZ1 169 aaKnown RBP13.59□□□□□ -0.23
CTCFL-203ENST00000422109 IPPKQ9H8X2 491 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 IL37Q9NZH6 218 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 UTS2RQ9UKP6 389 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 PKP3Q9Y446 797 aa13.59□□□□□ -0.23
CTCFL-203ENST00000422109 KANSL1LA0AUZ9 987 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 FAM92AA1XBS5 289 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 MATN4O95460 622 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 HRH2P25021 359 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 ELK4P28324 431 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 ERVK-8P63133 956 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 RING1Q06587 406 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 LRRC73Q5JTD7 316 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 TRAF7Q6Q0C0 670 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 GOLGA7Q7Z5G4 137 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 TMCO2Q7Z6W1 182 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-203ENST00000422109 DHRSXQ8N5I4 330 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 FAM86B1Q8N7N1 296 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 TTPALQ9BTX7 342 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 ADGRE3Q9BY15 652 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 ATXN10Q9UBB4 475 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 NBNO60934 754 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 MLYCDO95822 493 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 LDLRP01130 860 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 TCTN1Q2MV58 587 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 ARMC12Q5T9G4 340 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 SPATA19Q7Z5L4 167 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 STK32CQ86UX6 486 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 CLEC4FQ8N1N0 589 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 SNRNP27Q8WVK2 155 aaKnown RBP13.58□□□□□ -0.24
CTCFL-203ENST00000422109 NSMCE2Q96MF7 247 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 POLR1BQ9H9Y6 1135 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 POPDC3Q9HBV1 291 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 RIC8BQ9NVN3 520 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 TMEM161AQ9NX61 479 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 KLQ9UEF7 1012 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-203ENST00000422109 SLC8A2Q9UPR5 921 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 PRSS21Q9Y6M0 314 aa13.58□□□□□ -0.24
CTCFL-203ENST00000422109 ACOX3O15254 700 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 DFNA5O60443 496 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 SEC24AO95486 1093 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 RPS9P46781 194 aaKnown RBP13.57□□□□□ -0.24
CTCFL-203ENST00000422109 ESRRGP62508 458 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 CTBSQ01459 385 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 PRKG2Q13237 762 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 MRPL58Q14197 206 aaKnown RBP13.57□□□□□ -0.24
CTCFL-203ENST00000422109 CYP20A1Q6UW02 462 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 DEFB128Q7Z7B8 93 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 PDZD8Q8NEN9 1154 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 WFDC5Q8TCV5 224 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 AUTS2Q8WXX7 1259 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 CASD1Q96PB1 797 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 SLC22A12Q96S37 553 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 TNKS2Q9H2K2 1166 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 LATS2Q9NRM7 1088 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 ANKRD36A6QL64 1941 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 ZNF840PA6NDX5 716 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 CA12O43570 354 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 NOBOXO60393 691 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 CLDN11O75508 207 aa13.57□□□□□ -0.24
CTCFL-203ENST00000422109 S100BP04271 92 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms