RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 DDX56Q9NY93 547 aaKnown RBP11.12□□□□□ -0.63
NDUFA3-208ENST00000422029 RSPH14Q9UHP6 348 aa11.12□□□□□ -0.63
NDUFA3-208ENST00000422029 TMEM184BQ9Y519 407 aaPredicted RBP11.12□□□□□ -0.63
NDUFA3-208ENST00000422029 ARL5AQ9Y689 179 aa11.12□□□□□ -0.63
NDUFA3-208ENST00000422029 ASH1LQ9NR48 2969 aaKnown RBP11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 GLYATL1P3A0A0U1RQE8 302 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 MACROD2A1Z1Q3 448 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 PIPSLA2A3N6 862 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 PRR19A6NJB7 356 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 AKR1B15C9JRZ8 316 aaPredicted RBP11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 H7C0C1 242 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 GAPDHSO14556 408 aaPredicted RBP11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 SPAG6O75602 509 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 DNAJB5O75953 348 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 EBLN1P0CF75 366 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 RBL1P28749 1068 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 AKT1P31749 480 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 SPAM1P38567 509 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 ATP5OP48047 213 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 ABHD18Q0P651 414 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 TFDP2Q14188 446 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 PLCL1Q15111 1095 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 SLC1A5Q15758 541 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 LRRC38Q5VT99 294 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 PRAMEF17Q5VTA0 474 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 FAM69BQ5VUD6 431 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 AADACL2Q6P093 401 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 XKR5Q6UX68 686 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 DAAM2Q86T65 1068 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 AMZ2Q86W34 360 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 RAVER1Q8IY67 606 aaKnown RBP11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 ESX1Q8N693 406 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 APOBEC4Q8WW27 367 aaKnown RBP11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 STAMBPL1Q96FJ0 436 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 INSM2Q96T92 566 aaPredicted RBP11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 MAP3K3Q99759 626 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 RAD18Q9NS91 495 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 IL17CQ9P0M4 197 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 LCMT1Q9UIC8 334 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 PLAAQ9Y263 795 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 TP53TG5Q9Y2B4 290 aa11.11□□□□□ -0.63
NDUFA3-208ENST00000422029 TLN1Q9Y490 2541 aaKnown RBP11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 HECTD1Q9ULT8 2610 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 hCG_1818297A0A087WSY0 165 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 ZNF487B1APH4 448 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 ZRANB2O95218 330 aaKnown RBP eCLIP11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 HMGCLP35914 325 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 HALP42357 657 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 SLC1A1P43005 524 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 TNNT3P45378 269 aaPredicted RBP11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 CAPZBP47756 277 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 CHAF1BQ13112 559 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 XRCC4Q13426 336 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 TRIM14Q14142 442 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 GPR19Q15760 415 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 TAZQ16635 292 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 CCDC181Q5TID7 509 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 PWWP2BQ6NUJ5 590 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 OR4K2Q8NGD2 314 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 ZNF398Q8TD17 642 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 CT55Q8WUE5 264 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 VPS35Q96QK1 796 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 GORASP1Q9BQQ3 440 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 ZPBPQ9BS86 351 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 KLHL25Q9H0H3 589 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 ADNPQ9H2P0 1102 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 ZNF768Q9H5H4 540 aaKnown RBP11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 POT1Q9NUX5 634 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 FKBPLQ9UIM3 349 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 PKP3Q9Y446 797 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 PCDHA13Q9Y5I0 950 aa11.1□□□□□ -0.63
NDUFA3-208ENST00000422029 ZNF106Q9H2Y7 1883 aaKnown RBP11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 OR6C74A6NCV1 312 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 STX7O15400 261 aaKnown RBP11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 MTSS1O43312 755 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 LCA5LO95447 670 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 ANKRD34CP0C6C1 535 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 PRSS56P0CW18 603 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 VCLP18206 1134 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 NELFEP18615 380 aaKnown RBP11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 MSH3P20585 1137 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 FECHP22830 423 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 NR2C2P49116 596 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 ARL4DP49703 201 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 MLLT10P55197 1068 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 TBX2Q13207 712 aaPredicted RBP11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 TUBB3Q13509 450 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 TFDP3Q5H9I0 405 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 AGAP9Q5VTM2 703 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 PDPK2PQ6A1A2 396 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 RCOR2Q8IZ40 523 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 SIDT2Q8NBJ9 832 aaKnown RBP11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 OR13C4Q8NGS5 318 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 KLHL6Q8WZ60 621 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 ZDHHC12Q96GR4 267 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 C12orf66Q96MD2 445 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 CATSPER2Q96P56 530 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 QKIQ96PU8 341 aaKnown RBP eCLIP11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 FCRL5Q96RD9 977 aa11.09□□□□□ -0.63
NDUFA3-208ENST00000422029 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms