RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 FCRL3Q96P31 734 aaPredicted RBP15.49■□□□□ 0.07
BRAT1-202ENST00000421712 CCDC3Q9BQI4 270 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 CCM2Q9BSQ5 444 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 STN1Q9H668 368 aaKnown RBP15.49■□□□□ 0.07
BRAT1-202ENST00000421712 RNF215Q9Y6U7 377 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 IGLV3-16A0A075B6K0 115 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 MGAT4DA6NG13 374 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 OR5K4A6NMS3 321 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 ZW10O43264 779 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 OR1I1O60431 355 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 USP1O94782 785 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 AP2A2O94973 939 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 OR56A5P0C7T3 313 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 JUPP14923 745 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 PGAM1P18669 254 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 ALDH4A1P30038 563 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 HALP42357 657 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 PRLHRP49683 370 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 SLC7A5Q01650 507 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 SEMA3AQ14563 771 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 MSS51Q4VC12 460 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 DNTTIP2Q5QJE6 756 aaKnown RBP15.48■□□□□ 0.07
BRAT1-202ENST00000421712 KIAA0930Q6ICG6 404 aaPredicted RBP15.48■□□□□ 0.07
BRAT1-202ENST00000421712 ZNF449Q6P9G9 518 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 IYDQ6PHW0 289 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 SLC9B2Q86UD5 537 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 AGGF1Q8N302 714 aaeCLIP15.48■□□□□ 0.07
BRAT1-202ENST00000421712 OR2L2Q8NH16 312 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 SLC37A2Q8TED4 501 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 CFAP36Q96G28 342 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 EBNA1BP2Q99848 306 aaKnown RBP15.48■□□□□ 0.07
BRAT1-202ENST00000421712 LRRC1Q9BTT6 524 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 C20orf96Q9NUD7 363 aaPredicted RBP15.48■□□□□ 0.07
BRAT1-202ENST00000421712 IL1RAPL1Q9NZN1 696 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 WHRNQ9P202 907 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 MARCH4Q9P2E8 410 aaPredicted RBP15.48■□□□□ 0.07
BRAT1-202ENST00000421712 PSMD13Q9UNM6 376 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 PRSS21Q9Y6M0 314 aa15.48■□□□□ 0.07
BRAT1-202ENST00000421712 ASXL3Q9C0F0 2248 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 KIR2DS5A0A0G2JLQ3 304 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 A0A0G2JNG1 304 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 UBA6A0AVT1 1052 aaPredicted RBP15.47■□□□□ 0.07
BRAT1-202ENST00000421712 KLHL33A6NCF5 533 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 KIR2DS3K7RE56 304 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 QSOX1O00391 747 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 SGTAO43765 313 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 NUDT21O43809 227 aaKnown RBP15.47■□□□□ 0.07
BRAT1-202ENST00000421712 OPA1O60313 960 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 TOP3BO95985 862 aaKnown RBP15.47■□□□□ 0.07
BRAT1-202ENST00000421712 ITGB6P18564 788 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 SPINK2P20155 84 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 RP1P56715 2156 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 HHEXQ03014 270 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 KIR2DS5Q14953 304 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 LONRF1Q17RB8 773 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 HES3Q5TGS1 186 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 DUPD1Q68J44 220 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 PTRHD1Q6GMV3 140 aaKnown RBP15.47■□□□□ 0.07
BRAT1-202ENST00000421712 NEPROQ6NW34 567 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 PACS1Q6VY07 963 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 FAM83HQ6ZRV2 1179 aaPredicted RBP15.47■□□□□ 0.07
BRAT1-202ENST00000421712 RAB44Q7Z6P3 723 aaPredicted RBP15.47■□□□□ 0.07
BRAT1-202ENST00000421712 TMEM135Q86UB9 458 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 GALNT15Q8N3T1 639 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 SFRP1Q8N474 314 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 CEP112Q8N8E3 955 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.47■□□□□ 0.07
BRAT1-202ENST00000421712 CXorf40BQ96DE9 158 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 SLC38A3Q99624 504 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 NAT9Q9BTE0 207 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 RABGEF1Q9UJ41 708 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 CHMP2BQ9UQN3 213 aa15.47■□□□□ 0.07
BRAT1-202ENST00000421712 BPTFQ12830 3046 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 PPM1DO15297 605 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 DKK1O94907 266 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 TTC4O95801 387 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 VIPP01282 170 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 FTH1P02794 183 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 ARNTP27540 789 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 ELK3P41970 407 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 ARCN1P48444 511 aaKnown RBP15.46■□□□□ 0.07
BRAT1-202ENST00000421712 PLTPP55058 493 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 CLDN6P56747 220 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 CCL7P80098 99 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 INSM1Q01101 510 aaPredicted RBP15.46■□□□□ 0.07
BRAT1-202ENST00000421712 DMPKQ09013 629 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 PDIA2Q13087 525 aaKnown RBP15.46■□□□□ 0.07
BRAT1-202ENST00000421712 BRD3Q15059 726 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 AMZ1Q400G9 498 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 METRNLQ641Q3 311 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 CENPUQ71F23 418 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 C17orf82Q86X59 251 aaPredicted RBP15.46■□□□□ 0.07
BRAT1-202ENST00000421712 CCNJLQ8IV13 435 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 ANKMY2Q8IV38 441 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 HM13Q8TCT9 377 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 ELMO1Q92556 727 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 SH3KBP1Q96B97 665 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 LINC00615Q96LM1 132 aaPredicted RBP15.46■□□□□ 0.07
BRAT1-202ENST00000421712 TSSK1BQ9BXA7 367 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 ZMYND15Q9H091 742 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms