RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 FIGNQ5HY92 759 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 AGAP9Q5VTM2 703 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 TMEM220Q6QAJ8 160 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 DET1Q7L5Y6 550 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 LUZP1Q86V48 1076 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 APLFQ8IW19 511 aaPredicted RBP7.93□□□□□ -1.14
VIM-202ENST00000421459 MAP7D3Q8IWC1 876 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 RASGEF1AQ8N9B8 481 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 SPDYE1Q8NFV5 336 aaPredicted RBP7.93□□□□□ -1.14
VIM-202ENST00000421459 RNF25Q96BH1 459 aaPredicted RBP7.93□□□□□ -1.14
VIM-202ENST00000421459 SLC41A2Q96JW4 573 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 INSM2Q96T92 566 aaPredicted RBP7.93□□□□□ -1.14
VIM-202ENST00000421459 NAT10Q9H0A0 1025 aaKnown RBP7.93□□□□□ -1.14
VIM-202ENST00000421459 SLC25A51Q9H1U9 297 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 GLOD4Q9HC38 313 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 PDE7BQ9NP56 450 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 IL26Q9NPH9 171 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 FAM8A1Q9UBU6 413 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 EPHA6Q9UF33 1036 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 KCND3Q9UK17 655 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 RARRES3Q9UL19 164 aa7.93□□□□□ -1.14
VIM-202ENST00000421459 BZW2Q9Y6E2 419 aaKnown RBP7.93□□□□□ -1.14
VIM-202ENST00000421459 A0A1W2PQJ5 194 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 OR6C74A6NCV1 312 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 GPR89AB7ZAQ6 455 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 MASP2O00187 686 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 GAPDHSO14556 408 aaPredicted RBP7.92□□□□□ -1.14
VIM-202ENST00000421459 ZNF185O15231 689 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 VEGFDO43915 354 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 GYPCP04921 128 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 GPR89BP0CG08 455 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 FECHP22830 423 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 PTPN4P29074 926 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 PTGIRP43119 386 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 ITGA1P56199 1179 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 ZBED6P86452 979 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 ADCY2Q08462 1091 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 GPS2Q13227 327 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 UGT8Q16880 541 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 SIRPB2Q5JXA9 342 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 FHL5Q5TD97 284 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 SLC9A4Q6AI14 798 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 ZNF787Q6DD87 383 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 FAM151BQ6UXP7 276 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 WASH2PQ6VEQ5 465 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 RFX6Q8HWS3 928 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 RHOT1Q8IXI2 618 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 LILRA3Q8N6C8 439 aaPredicted RBP7.92□□□□□ -1.14
VIM-202ENST00000421459 AVL9Q8NBF6 648 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 SYN2Q92777 582 aaPredicted RBP7.92□□□□□ -1.14
VIM-202ENST00000421459 MR1Q95460 341 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 C19orf60Q96EN9 201 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 ZNF514Q96K75 400 aaPredicted RBP7.92□□□□□ -1.14
VIM-202ENST00000421459 ZNF830Q96NB3 372 aaPredicted RBP7.92□□□□□ -1.14
VIM-202ENST00000421459 OLFM3Q96PB7 478 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 GBP4Q96PP9 640 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 VPS35Q96QK1 796 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 SLC25A23Q9BV35 468 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 RAB33BQ9H082 229 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 WWP1Q9H0M0 922 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 ING2Q9H160 280 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 CHST8Q9H2A9 424 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 C10orf88Q9H8K7 445 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 CBX8Q9HC52 389 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 WASH6PQ9NQA3 447 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 FGF21Q9NSA1 209 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 IMP3Q9NV31 184 aaKnown RBP7.92□□□□□ -1.14
VIM-202ENST00000421459 HRASLS2Q9NWW9 162 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 SEMA5BQ9P283 1151 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 CAPN11Q9UMQ6 739 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 FARSAQ9Y285 508 aaKnown RBP7.92□□□□□ -1.14
VIM-202ENST00000421459 MAP4K5Q9Y4K4 846 aa7.92□□□□□ -1.14
VIM-202ENST00000421459 UBA6A0AVT1 1052 aaPredicted RBP7.91□□□□□ -1.14
VIM-202ENST00000421459 OR5K3A6NET4 321 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 TCP11X1B4DZS4 312 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 C21orf140B9A014 251 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 APOL1O14791 398 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 KRT86O43790 486 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 SCRG1O75711 98 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 SORBS2O94875 1100 aaKnown RBP7.91□□□□□ -1.14
VIM-202ENST00000421459 NDST3O95803 873 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 MT-ND3P03897 115 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 KRT1P04264 644 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 PECAM1P16284 738 aaPredicted RBP7.91□□□□□ -1.14
VIM-202ENST00000421459 POLR2CP19387 275 aaPredicted RBP7.91□□□□□ -1.14
VIM-202ENST00000421459 NFKB1P19838 968 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 PTPN3P26045 913 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 HALP42357 657 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 ARL4DP49703 201 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 PGDP52209 483 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 KPNA2P52292 529 aaKnown RBP7.91□□□□□ -1.14
VIM-202ENST00000421459 WNT3AP56704 352 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 UBASH3AP57075 661 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 RPS15P62841 145 aaKnown RBP7.91□□□□□ -1.14
VIM-202ENST00000421459 WASHC5Q12768 1159 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 OLIG2Q13516 323 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 GTF2H3Q13889 308 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 PLCL1Q15111 1095 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 TEX44Q53QW1 395 aa7.91□□□□□ -1.14
VIM-202ENST00000421459 DNTTIP2Q5QJE6 756 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms