RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MTUS1Q9ULD2 1270 aa3.9□□□□□ -1.79
HMGB3P20-201ENST00000417997 FZD4Q9ULV1 537 aa3.9□□□□□ -1.79
HMGB3P20-201ENST00000417997 PCDHB7Q9Y5E2 793 aa3.9□□□□□ -1.79
HMGB3P20-201ENST00000417997 PLXNA3P51805 1871 aa3.9□□□□□ -1.79
HMGB3P20-201ENST00000417997 LY6G6EA0A0G2JKS1 128 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 RHPN2P1A8MT19 583 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 I3L4J1 428 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 INSIG1O15503 277 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 B3GAT3O94766 335 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 FGGP02679 453 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 TUBBP07437 444 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM200BP0CF97 657 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 HSPA8P11142 646 aaKnown RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 KRT3P12035 628 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 RPL17P18621 184 aaKnown RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 DRD1P21728 446 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ACAT1P24752 427 aaKnown RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 SDC4P31431 198 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 HTR7P34969 479 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 TNNT3P45378 269 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ACADSBP45954 432 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 BRCC3P46736 316 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 OR1G1P47890 313 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 LHX1P48742 406 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 MARCKSL1P49006 195 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 CTCFP49711 727 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 VPS41P49754 854 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 CCL23P55773 120 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 GSCP56915 257 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 C1QTNF8P60827 252 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 RAE1P78406 368 aaKnown RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 HSF1Q00613 529 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 TSPY1Q01534 308 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 YWHAHQ04917 246 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 PTP4A2Q12974 167 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 GPS1Q13098 491 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 MAMLD1Q13495 774 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 PIGHQ14442 188 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 BRD3Q15059 726 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 CNGA3Q16281 694 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 PKN2Q16513 984 aaKnown RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 UPP1Q16831 310 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 SOWAHAQ2M3V2 549 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 MDH1BQ5I0G3 518 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 SPOUT1Q5T280 376 aaKnown RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 WSCD1Q658N2 575 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ARHGAP17Q68EM7 881 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 FBXO38Q6PIJ6 1188 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM43BQ6ZT52 329 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM183BPQ6ZVS7 135 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 DEFB128Q7Z7B8 93 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZDHHC17Q8IUH5 632 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 KLHL7Q8IXQ5 586 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 SIX6OS1Q8N1H7 587 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 THEM5Q8N1Q8 247 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 LRRC43Q8N309 656 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 RASGEF1CQ8N431 466 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 CCDC33Q8N5R6 958 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 C12orf29Q8N999 325 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 NOA1Q8NC60 698 aaKnown RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 SPATA4Q8NEY3 305 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 DBF4BQ8NFT6 615 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 MBD3L2Q8NHZ7 208 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 SPATA18Q8TC71 538 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLC2A14Q8TDB8 520 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ACTRT1Q8TDG2 376 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ANKRD7Q92527 254 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 RUBCNQ92622 972 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 KRT35Q92764 455 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 TIFAQ96CG3 184 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 SMARCD1Q96GM5 515 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZDHHC12Q96GR4 267 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 RBM41Q96IZ5 413 aaKnown RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 MS4A14Q96JA4 679 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 SENP8Q96LD8 212 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 RUNDC3BQ96NL0 473 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 CPXM1Q96SM3 734 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 KRT12Q99456 494 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 TM2D2Q9BX73 214 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 UNKQ9C0B0 810 aaKnown RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 BTBD1Q9H0C5 482 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 RAB17Q9H0T7 212 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 C11orf49Q9H6J7 331 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ELAC1Q9H777 363 aaKnown RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 LRRC4Q9HBW1 653 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ASNSD1Q9NWL6 643 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 MIOSQ9NXC5 875 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 RASAL2Q9UJF2 1139 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 CDH9Q9ULB4 789 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 PRG3Q9Y2Y8 225 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 HS3ST3B1Q9Y662 390 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ALG6Q9Y672 507 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 SIRT4Q9Y6E7 314 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 VWA8A3KMH1 1905 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 PTPRSQ13332 1948 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 ALPK3Q96L96 1907 aa3.89□□□□□ -1.79
HMGB3P20-201ENST00000417997 TARSL2A2RTX5 802 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 LRRD1A4D1F6 860 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 SIGLEC16A6NMB1 481 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 XPO1O14980 1071 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms