RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 TMEM30AQ9NV96 361 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 EXD2Q9NVH0 621 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 COMMD8Q9NX08 183 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.77□□□□□ -1.17
VRK2-203ENST00000417641 IKZF3Q9UKT9 509 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 TIMM22Q9Y584 194 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 COL1A2P08123 1366 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 SMIM28A0A1B0GU29 152 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 CENPBD1B2RD01 187 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 DFFAO00273 331 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 GABRDO14764 452 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 SNPHO15079 494 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 ANKRD28O15084 1053 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 HOXC11O43248 304 aaPredicted RBP7.77□□□□□ -1.17
VRK2-203ENST00000417641 SCO2O43819 266 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 KLK8O60259 260 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 USP2O75604 605 aaPredicted RBP7.77□□□□□ -1.17
VRK2-203ENST00000417641 CHEK2O96017 543 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 GOT2P00505 430 aaKnown RBP7.77□□□□□ -1.17
VRK2-203ENST00000417641 CST1P01037 141 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 GSNP06396 782 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 ZNF37AP17032 561 aaPredicted RBP7.77□□□□□ -1.17
VRK2-203ENST00000417641 CXCR2P25025 360 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 PRDX3P30048 256 aaKnown RBP7.77□□□□□ -1.17
VRK2-203ENST00000417641 UGT2B10P36537 528 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 TGFBR1P36897 503 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 CXCR4P61073 352 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 LSM3P62310 102 aaKnown RBP7.77□□□□□ -1.17
VRK2-203ENST00000417641 ERVK-8P63133 956 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 ACVR1Q04771 509 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 SOX4Q06945 474 aaPredicted RBP7.77□□□□□ -1.17
VRK2-203ENST00000417641 RAPSNQ13702 412 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 MAPK11Q15759 364 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 NPTX1Q15818 432 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 SETMARQ53H47 684 aaPredicted RBP7.77□□□□□ -1.17
VRK2-203ENST00000417641 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.77□□□□□ -1.17
VRK2-203ENST00000417641 STEAP3Q658P3 488 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 Q6ZSR9 355 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 RAB44Q7Z6P3 723 aaPredicted RBP7.77□□□□□ -1.17
VRK2-203ENST00000417641 DPP9Q86TI2 863 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 LRRC49Q8IUZ0 686 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 NIM1KQ8IY84 436 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 SLC22A15Q8IZD6 547 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 AADATQ8N5Z0 425 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 TOP6BLQ8N6T0 577 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 OR8J3Q8NGG0 315 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 OR5K1Q8NHB7 308 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 CNIH3Q8TBE1 160 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 MCOLN3Q8TDD5 553 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 CAPSLQ8WWF8 208 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 UGT2B28Q9BY64 529 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 NDEL1Q9GZM8 345 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 NEK6Q9HC98 313 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 RBM22Q9NW64 420 aaKnown RBP eCLIP7.77□□□□□ -1.17
VRK2-203ENST00000417641 HACL1Q9UJ83 578 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 EIF3LQ9Y262 564 aaKnown RBP7.77□□□□□ -1.17
VRK2-203ENST00000417641 PCDHB14Q9Y5E9 798 aa7.77□□□□□ -1.17
VRK2-203ENST00000417641 NUP205Q92621 2012 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 ZNF236Q9UL36 1845 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 SHROOM3Q8TF72 1996 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 DNAJC25-GNG10A0A024R161 153 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 A6NL46 340 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 CLDN24A6NM45 220 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 E9PQ18 207 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 MAN1A2O60476 641 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 MRPS14O60783 128 aaKnown RBP7.76□□□□□ -1.17
VRK2-203ENST00000417641 CNMDO75829 334 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 RECQL4O94761 1208 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 SEC24AO95486 1093 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 IGLV3-25P01717 112 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 CD4P01730 458 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 LGALS2P05162 132 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 MMP2P08253 660 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 PNPLA4P41247 253 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 TAF6P49848 677 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 SERPINH1P50454 418 aaKnown RBP7.76□□□□□ -1.17
VRK2-203ENST00000417641 MTPNP58546 118 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 ARHGAP1Q07960 439 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 LAPTM5Q13571 262 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 PWP1Q13610 501 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 CARTPTQ16568 116 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 C6orf136Q5SQH8 315 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 MARCH8Q5T0T0 291 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 CES5AQ6NT32 575 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 SLC27A1Q6PCB7 646 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 FBXO16Q8IX29 292 aaPredicted RBP7.76□□□□□ -1.17
VRK2-203ENST00000417641 PLPP6Q8IY26 295 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 ABI1Q8IZP0 508 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 SVOPQ8N4V2 548 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 ATPAF2Q8N5M1 289 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 ZNF548Q8NEK5 533 aaPredicted RBP7.76□□□□□ -1.17
VRK2-203ENST00000417641 PSMA8Q8TAA3 256 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 ATL1Q8WXF7 558 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 HTRA1Q92743 480 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 RPL3LQ92901 407 aaKnown RBP7.76□□□□□ -1.17
VRK2-203ENST00000417641 EXT2Q93063 718 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 KIAA1191Q96A73 305 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 LGALS12Q96DT0 336 aa7.76□□□□□ -1.17
VRK2-203ENST00000417641 PABPC5Q96DU9 382 aaKnown RBP7.76□□□□□ -1.17
VRK2-203ENST00000417641 ZNF560Q96MR9 790 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms