RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 FAM69BQ5VUD6 431 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 C6orf15Q6UXA7 325 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-202ENST00000416769 SYT10Q6XYQ8 523 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 TMEM26Q6ZUK4 368 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 ASB18Q6ZVZ8 466 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 B4GALNT4Q76KP1 1039 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 ADGRG6Q86SQ4 1221 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 NLRP8Q86W28 1048 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 ZNF547Q8IVP9 402 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 PQLC3Q8N755 202 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 GPR26Q8NDV2 337 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 CT55Q8WUE5 264 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 C16orf45Q96MC5 204 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-202ENST00000416769 FAM83DQ9H4H8 585 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 LUZP4Q9P127 313 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 LNPEPQ9UIQ6 1025 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 TMPRSS11EQ9UL52 423 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 SNX12Q9UMY4 172 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 SHOC2Q9UQ13 582 aa12.69□□□□□ -0.38
LINC00339-202ENST00000416769 PCSK5Q92824 1860 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 CREBBPQ92793 2442 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 hCG_1818297A0A087WSY0 165 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 KIR2DS5A0A0G2JLQ3 304 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 A0A0G2JNG1 304 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 KIR2DS3K7RE56 304 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 KCNK1O00180 336 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 MATN3O15232 486 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 SEMA7AO75326 666 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 UBXN7O94888 489 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 ZFXP17010 805 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-202ENST00000416769 NFKBIAP25963 317 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 RPL10P27635 214 aaKnown RBP12.68□□□□□ -0.38
LINC00339-202ENST00000416769 CA5AP35218 305 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 SERPINB6P35237 376 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 TFDP2Q14188 446 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 KIR2DS5Q14953 304 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 NADK2Q4G0N4 442 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 SEL1L2Q5TEA6 688 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 FAM199XQ6PEV8 388 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-202ENST00000416769 PHYKPLQ8IUZ5 450 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 CCDC50Q8IVM0 306 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 CNTD1Q8N815 330 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 TEX19Q8NA77 164 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 NAT14Q8WUY8 206 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 LYSMD1Q96S90 227 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 OSBPL9Q96SU4 736 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 ZPBPQ9BS86 351 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 OSBPL8Q9BZF1 889 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 WDR37Q9Y2I8 494 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 KCTD3Q9Y597 815 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 SAR1BQ9Y6B6 198 aa12.68□□□□□ -0.38
LINC00339-202ENST00000416769 PDZK1P1A8MUH7 402 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 AURKAO14965 403 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 FANCGO15287 622 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 GPR39O43194 453 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 SPAG6O75602 509 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 RASSF9O75901 435 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 PMS2P54278 862 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 MC1RQ01726 317 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 DNASE1L3Q13609 305 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 IL10RAQ13651 578 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 SEPT6Q14141 434 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 MAP7Q14244 749 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 GPR18Q14330 331 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 PAFAH1B3Q15102 231 aaKnown RBP12.67□□□□□ -0.38
LINC00339-202ENST00000416769 NOMO1Q15155 1222 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 SLC9A4Q6AI14 798 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 TCTN3Q6NUS6 607 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 RFX6Q8HWS3 928 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 PLXDC1Q8IUK5 500 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 RASGRP3Q8IV61 690 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 CCDC13Q8IYE1 715 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 RASGEF1CQ8N431 466 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 GPR150Q8NGU9 434 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 SH3KBP1Q96B97 665 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 STAMBPL1Q96FJ0 436 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 EFHD1Q9BUP0 239 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 SPATA16Q9BXB7 569 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 TWSG1Q9GZX9 223 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 TRIT1Q9H3H1 467 aaKnown RBP12.67□□□□□ -0.38
LINC00339-202ENST00000416769 ZNF768Q9H5H4 540 aaKnown RBP12.67□□□□□ -0.38
LINC00339-202ENST00000416769 STN1Q9H668 368 aaKnown RBP12.67□□□□□ -0.38
LINC00339-202ENST00000416769 TTC7AQ9ULT0 858 aaPredicted RBP12.67□□□□□ -0.38
LINC00339-202ENST00000416769 POLHQ9Y253 713 aa12.67□□□□□ -0.38
LINC00339-202ENST00000416769 IGHV5-51A0A0C4DH38 117 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 A1L4Q6 167 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 PIPSLA2A3N6 862 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 MKRN2OSH3BPM6 223 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 CEP104O60308 925 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 CST8O60676 142 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 CREG1O75629 220 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 RFPL1O75677 317 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 TJP3O95049 919 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 VIPP01282 170 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 JCHAINP01591 159 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 NTRK1P04629 796 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 PYGLP06737 847 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 FOLR1P15328 257 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 AMD1P17707 334 aa12.66□□□□□ -0.38
LINC00339-202ENST00000416769 CXCR5P32302 372 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms