RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 KCNK6Q9Y257 313 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 WBP11Q9Y2W2 641 aaKnown RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CGNL1Q0VF96 1302 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SENP3-EIF4A1A0A087X0R7 540 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 LOC105369274A0A096LPK9 316 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 LOC102723532A0A0G2JNH3 316 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 GXYLT2A0PJZ3 443 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM90A8PA6NJQ4 464 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 NPIPB13A6NJU9 1138 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 IQCF5A8MTL0 148 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 MAGEB17A8MXT2 336 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 NPIPB4C9JG80 1138 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 E9PMD0 336 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 F8W810 466 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ACOT7O00154 380 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TLR4O00206 839 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TERTO14746 1132 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF213O14771 459 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ANKRD28O15084 1053 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 HDAC3O15379 428 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CAPN5O15484 640 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ARHGEF9O43307 516 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF208O43345 1280 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 WIPF1O43516 503 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 DCXO43602 365 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CYTH3O43739 400 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 LILRB5O75023 590 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ATG13O75143 517 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ATP6V1G1O75348 118 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 MOSPD3O75425 235 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CLN5O75503 358 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 DFFBO76075 338 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SORBS2O94875 1100 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 GLCEO94923 617 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 PGLSO95336 258 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CBX7O95931 251 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 BCL10O95999 233 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 NDUFB10O96000 172 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CALCAP01258 141 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 PLEKP08567 350 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 HOXB5P09067 269 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 INHBBP09529 407 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 IQCF3P0C7M6 154 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM90A13PP0C7W8 464 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM90A24PP0C7X0 464 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 EZRP15311 586 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FAHP16930 419 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 HTR2AP28223 471 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 HOXD9P28356 352 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 RBL1P28749 1068 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CD6P30203 668 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 EVI2BP34910 448 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 PTPN7P35236 360 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC16A2P36021 539 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CHI3L1P36222 383 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ALDH1A3P47895 512 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 HTR6P50406 440 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 MVDP53602 400 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 NCKAP1LP55160 1127 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CLDN8P56748 225 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CORO7P57737 925 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SELENOVP59797 346 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 YBX1P67809 324 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CD69Q07108 199 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TGM3Q08188 693 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 DYRK1AQ13627 763 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ALKBH1Q13686 389 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 DGCR6Q14129 220 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SCARF1Q14162 830 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 MVPQ14764 893 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CASP8Q14790 479 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 GPR162Q16538 588 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 BCL2A1Q16548 175 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 DUOXA2Q1HG44 320 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF829Q3KNS6 432 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SGO1Q5FBB7 561 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TBC1D9BQ66K14 1250 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 PMS2CLQ68D20 193 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 NCR3LG1Q68D85 454 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 KCTD11Q693B1 232 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SNRNP48Q6IEG0 339 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 KIAA1161Q6NSJ0 714 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TTC23LQ6PF05 361 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 GLB1LQ6UWU2 654 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CFAP77Q6ZQR2 320 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 KCTD8Q6ZWB6 473 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 KCTD20Q7Z5Y7 419 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 PLEKHH3Q7Z736 793 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 LUZP2Q86TE4 346 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 AACSQ86V21 672 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CABP7Q86V35 215 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM131BQ86XD5 332 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 DCP2Q8IU60 420 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FOXP4Q8IVH2 680 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC15A3Q8IY34 581 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FMR1NBQ8N0W7 255 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 OR4N4Q8N0Y3 316 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 LSMEM2Q8N112 164 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CPXM2Q8N436 756 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms