RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 POT1Q9NUX5 634 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 PILRAQ9UKJ1 303 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 EFR3BQ9Y2G0 817 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 R3HDM2Q9Y2K5 976 aaKnown RBP14.83□□□□□ -0.04
UBXN4-203ENST00000416538 CAPN6Q9Y6Q1 641 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 FER1L5A0AVI2 2057 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 CCDC66A2RUB6 948 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 KIF1CO43896 1103 aaKnown RBP14.82□□□□□ -0.04
UBXN4-203ENST00000416538 RAD1O60671 282 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 FTCDO95954 541 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 VIPP01282 170 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 ANKRD34CP0C6C1 535 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 PBLDP30039 288 aaPredicted RBP14.82□□□□□ -0.04
UBXN4-203ENST00000416538 ZNF140P52738 457 aaPredicted RBP14.82□□□□□ -0.04
UBXN4-203ENST00000416538 GDF10P55107 478 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 RWDD2BP57060 319 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 DMPKQ09013 629 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 KLF1Q13351 362 aaPredicted RBP14.82□□□□□ -0.04
UBXN4-203ENST00000416538 SPARCL1Q14515 664 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 CCDC181Q5TID7 509 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 ITPRIPL1Q6GPH6 555 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 DUS1LQ6P1R4 473 aaKnown RBP14.82□□□□□ -0.04
UBXN4-203ENST00000416538 DET1Q7L5Y6 550 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 OR4K2Q8NGD2 314 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 OR13C4Q8NGS5 318 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 C9orf72Q96LT7 481 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.82□□□□□ -0.04
UBXN4-203ENST00000416538 SLC40A1Q9NP59 571 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 PSMD13Q9UNM6 376 aa14.82□□□□□ -0.04
UBXN4-203ENST00000416538 STX7O15400 261 aaKnown RBP14.81□□□□□ -0.04
UBXN4-203ENST00000416538 ANXA9O76027 345 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 UBXN7O94888 489 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 ZIC2O95409 532 aaPredicted RBP14.81□□□□□ -0.04
UBXN4-203ENST00000416538 ZNF28P17035 718 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 CAPZBP47756 277 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 NAP1L1P55209 391 aaKnown RBP14.81□□□□□ -0.04
UBXN4-203ENST00000416538 RAB15P59190 212 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 SH3BP2P78314 561 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 GTF2H3Q13889 308 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 TAF1AQ15573 450 aaPredicted RBP14.81□□□□□ -0.04
UBXN4-203ENST00000416538 LDLRAP1Q5SW96 308 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 DCAF12Q5T6F0 453 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 ZDHHC20Q5W0Z9 365 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 KCTD11Q693B1 232 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 DARS2Q6PI48 645 aaKnown RBP14.81□□□□□ -0.04
UBXN4-203ENST00000416538 TMEM220Q6QAJ8 160 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 TRIM48Q8IWZ4 208 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 LILRA3Q8N6C8 439 aaPredicted RBP14.81□□□□□ -0.04
UBXN4-203ENST00000416538 AVL9Q8NBF6 648 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 CCDC112Q8NEF3 446 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 MED8Q96G25 268 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 TGM7Q96PF1 710 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 BAG1Q99933 345 aaPredicted RBP14.81□□□□□ -0.04
UBXN4-203ENST00000416538 EPB41L1Q9H4G0 881 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 PKP3Q9Y446 797 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 PCDHB11Q9Y5F2 797 aa14.81□□□□□ -0.04
UBXN4-203ENST00000416538 TENM4Q6N022 2769 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 PYCARD-AS1I3L0S3 204 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 CAPN5O15484 640 aaPredicted RBP14.8□□□□□ -0.04
UBXN4-203ENST00000416538 POP7O75817 140 aaKnown RBP14.8□□□□□ -0.04
UBXN4-203ENST00000416538 SRP72O76094 671 aaKnown RBP14.8□□□□□ -0.04
UBXN4-203ENST00000416538 METTL18O95568 372 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 DLGAP3O95886 979 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 FAM87AP0C7U9 286 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 PRSS56P0CW18 603 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 LPOP22079 712 aaPredicted RBP14.8□□□□□ -0.04
UBXN4-203ENST00000416538 IDSP22304 550 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 ITGA9Q13797 1035 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 RPE65Q16518 533 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 TBR1Q16650 682 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 FNBP1LQ5T0N5 605 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 KIAA1328Q86T90 577 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 AMZ2Q86W34 360 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 UNC5BQ8IZJ1 945 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 CACNA2D3Q8IZS8 1091 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 ZNF398Q8TD17 642 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 FBXO8Q9NRD0 319 aa14.8□□□□□ -0.04
UBXN4-203ENST00000416538 TMEM184BQ9Y519 407 aaPredicted RBP14.8□□□□□ -0.04
UBXN4-203ENST00000416538 CFAP20Q9Y6A4 193 aaKnown RBP14.8□□□□□ -0.04
UBXN4-203ENST00000416538 LOC101059948A0A1B0GTJ6 334 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 AGAP14A8MT82 685 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 LDB2O43679 373 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 PPFIA2O75334 1257 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 STK17BO94768 372 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 IPO7O95373 1038 aaKnown RBP14.79□□□□□ -0.04
UBXN4-203ENST00000416538 ITGB6P18564 788 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 AKT1P31749 480 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 TNNT3P45378 269 aaPredicted RBP14.79□□□□□ -0.04
UBXN4-203ENST00000416538 SEPHS1P49903 392 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 CDKN1CP49918 316 aaPredicted RBP14.79□□□□□ -0.04
UBXN4-203ENST00000416538 ATP1A2P50993 1020 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 TMPRSS15P98073 1019 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 PEX26Q7Z412 305 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 PRSS42Q7Z5A4 293 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 PLXDC1Q8IUK5 500 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 IL22RA1Q8N6P7 574 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 SPC24Q8NBT2 197 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 SLC35B2Q8TB61 432 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 BRSK1Q8TDC3 778 aa14.79□□□□□ -0.04
UBXN4-203ENST00000416538 CXorf40BQ96DE9 158 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms