RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 SFRP1Q8N474 314 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 DHRSXQ8N5I4 330 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 CANT1Q8WVQ1 401 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 IGSF8Q969P0 613 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 P2RY11Q96G91 374 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 TXNDC15Q96J42 360 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 RIPOR3Q96MK2 946 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 CSPG4P5Q96PW8 444 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 BCL7BQ9BQE9 202 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 ZNF670Q9BS34 389 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 LINC00597Q9H2U6 94 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 MRPL46Q9H2W6 279 aaKnown RBP13.11□□□□□ -0.31
HNF4A-204ENST00000415691 UBE2ZQ9H832 354 aaPredicted RBP13.11□□□□□ -0.31
HNF4A-204ENST00000415691 SACM1LQ9NTJ5 587 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 A0A096LPK6 155 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 SAC3D1A6NKF1 404 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 H0YAE9 185 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 GMNNO75496 209 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 TCEA1P23193 301 aaKnown RBP13.11□□□□□ -0.31
HNF4A-204ENST00000415691 FASP25445 335 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 SQLEQ14534 574 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 INPP5AQ14642 412 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 TIGD2Q4W5G0 525 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 SPANXN3Q5MJ09 141 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 BROXQ5VW32 411 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 REP15Q6BDI9 236 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 NXNQ6DKJ4 435 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 FBXL22Q6P050 247 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 Q6ZNB5 142 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 HTR3DQ70Z44 454 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 ZNF683Q8IZ20 524 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 CFAP52Q8N1V2 620 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 PCDH20Q8N6Y1 951 aaKnown RBP13.11□□□□□ -0.31
HNF4A-204ENST00000415691 LILRB4Q8NHJ6 448 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 SNX19Q92543 992 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 C1orf74Q96LT6 269 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 ASB16Q96NS5 453 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 MUC3BQ9H195 1237 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 SIAEQ9HAT2 523 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 MRM3Q9HC36 420 aaKnown RBP13.11□□□□□ -0.31
HNF4A-204ENST00000415691 CPNE5Q9HCH3 593 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 SMPD3Q9NY59 655 aaPredicted RBP13.11□□□□□ -0.31
HNF4A-204ENST00000415691 MPP6Q9NZW5 540 aa13.11□□□□□ -0.31
HNF4A-204ENST00000415691 IFT80Q9P2H3 777 aaPredicted RBP13.11□□□□□ -0.31
HNF4A-204ENST00000415691 E9PAM4 449 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 RNF103O00237 685 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 EIF3FO00303 357 aaPredicted RBP13.1□□□□□ -0.31
HNF4A-204ENST00000415691 EEF2KO00418 725 aaKnown RBP13.1□□□□□ -0.31
HNF4A-204ENST00000415691 NUAK1O60285 661 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 SEC24DO94855 1032 aaPredicted RBP13.1□□□□□ -0.31
HNF4A-204ENST00000415691 TACR2P21452 398 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 IL10P22301 178 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 EEF1DP29692 281 aaKnown RBP13.1□□□□□ -0.31
HNF4A-204ENST00000415691 HADHAP40939 763 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 GRIA1P42261 906 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 GRIA4P48058 902 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 NR2C2P49116 596 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 SLC11A2P49281 568 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 SGSHP51688 502 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 SMUG1Q53HV7 270 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 CASC4Q6P4E1 433 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 VASH1Q7L8A9 365 aaPredicted RBP13.1□□□□□ -0.31
HNF4A-204ENST00000415691 CMC1Q7Z7K0 106 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 CIR1Q86X95 450 aaPredicted RBP13.1□□□□□ -0.31
HNF4A-204ENST00000415691 AGR3Q8TD06 166 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 CALML6Q8TD86 181 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 SUSD6Q92537 303 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 CERS2Q96G23 380 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 QKIQ96PU8 341 aaKnown RBP eCLIP13.1□□□□□ -0.313e-10■■■■■ 33.1
HNF4A-204ENST00000415691 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.1□□□□□ -0.313e-7■■■□□ 15.6
HNF4A-204ENST00000415691 ZDHHC2Q9UIJ5 367 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 POU2F3Q9UKI9 436 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 NEU3Q9UQ49 428 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 CARD8Q9Y2G2 431 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 ANKRD6Q9Y2G4 727 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 RBMX2Q9Y388 322 aaKnown RBP13.1□□□□□ -0.31
HNF4A-204ENST00000415691 TIMM22Q9Y584 194 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 BRWD1Q9NSI6 2320 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 RNF103-CHMP3A0A140T963 221 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 M0QX08 132 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 ACOX3O15254 700 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 CNTN5O94779 1100 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 GSTM2P28161 218 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 MTHFRP42898 656 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 ZNF77Q15935 545 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 SPATS1Q496A3 300 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 CYBRD1Q53TN4 286 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 TBCELQ5QJ74 424 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 ADGRF1Q5T601 910 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 MANEALQ5VSG8 457 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 TANGO2Q6ICL3 276 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 CYP2R1Q6VVX0 501 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 GK5Q6ZS86 529 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 LGI2Q8N0V4 545 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 PIK3C3Q8NEB9 887 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 USP33Q8TEY7 942 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 CYGBQ8WWM9 190 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 SMARCD2Q92925 531 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 SLC25A23Q9BV35 468 aa13.1□□□□□ -0.31
HNF4A-204ENST00000415691 ACE2Q9BYF1 805 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms