RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PTPRCAPQ14761 206 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 VWC2Q2TAL6 325 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 BRAT1Q6PJG6 821 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 IRF2BP2Q7Z5L9 587 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 FJX1Q86VR8 437 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 ZNF34Q8IZ26 560 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 ZNF713Q8N859 430 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 OR2AJ1Q8NGZ0 328 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 OR5R1Q8NH85 324 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 EXD1Q8NHP7 514 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 GDAP1Q8TB36 358 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 OR6C1Q96RD1 312 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 SYT17Q9BSW7 474 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 SPRY4Q9C004 299 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 DCLK3Q9C098 648 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 PRMT7Q9NVM4 692 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 COQ3Q9NZJ6 369 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 RCC2Q9P258 522 aaKnown RBP4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 DNAJB9Q9UBS3 223 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 A0A1W2PPM1 405 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 WDR91A4D1P6 747 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 LINC01553A4QN01 128 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 ANKUB1A6NFN9 424 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 OR6C76A6NM76 312 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 H0YAE9 185 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 TRIM77I1YAP6 450 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 SOCS2O14508 198 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 TO15178 435 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 XRCC3O43542 346 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 TSPAN1O60635 241 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 HOXC8P31273 242 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 PLCD1P51178 756 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 CDK3Q00526 305 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 MZT1Q08AG7 82 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 PLA2G7Q13093 441 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 DHX34Q14147 1143 aaKnown RBP4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 KLHL26Q53HC5 615 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 XKR9Q5GH70 373 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 FAM69BQ5VUD6 431 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 PLA2G4FQ68DD2 849 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 ATG9AQ7Z3C6 839 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 CHERPQ8IWX8 916 aaKnown RBP4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 SRRM1Q8IYB3 904 aaKnown RBP4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 CCDC170Q8IYT3 715 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 SIX6OS1Q8N1H7 587 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 TMCO5AQ8N6Q1 288 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 PPP4R1Q8TF05 950 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 MTBPQ96DY7 904 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 SPDL1Q96EA4 605 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 ARSGQ96EG1 525 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 C3orf30Q96M34 536 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 QRFPRQ96P65 431 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 MOV10L1Q9BXT6 1211 aaKnown RBP4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 COPS7BQ9H9Q2 264 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 HIF1ANQ9NWT6 349 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 ELOVL5Q9NYP7 299 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 RHCGQ9UBD6 479 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 AGO1Q9UL18 857 aaKnown RBP4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 PTPRCP08575 1304 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 ZNF541Q9H0D2 1346 aa4.66□□□□□ -1.66
HMGB3P31-201ENST00000413333 PRAG1Q86YV5 1406 aa4.65□□□□□ -1.66
HMGB3P31-201ENST00000413333 LY6G6EA0A0G2JKS1 128 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 GOLGA6L9A6NEM1 432 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 HEPACAM2A8MVW5 462 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 PPEF2O14830 753 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 SYNCRIPO60506 623 aaKnown RBP4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 MOSPD3O75425 235 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 TOMM70O94826 608 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 SRCP12931 536 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 MCCP23508 829 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 CORO1AP31146 461 aaKnown RBP4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 MTHFRP42898 656 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 CTSCP53634 463 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 HNRNPKP61978 463 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 SCN1BQ07699 218 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 PTK6Q13882 451 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 NFE2L1Q14494 772 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 E2F5Q15329 346 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 SYCE2Q6PIF2 218 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 MEPCEQ7L2J0 689 aaKnown RBP4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 DET1Q7L5Y6 550 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 DNAJC10Q8IXB1 793 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 NUP93Q8N1F7 819 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 PGBD5Q8N414 524 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 C1orf52Q8N6N3 182 aaKnown RBP4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 PRR26Q8N8Z3 221 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 THAP6Q8TBB0 222 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 ASB5Q8WWX0 329 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 SEPHS2Q99611 448 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 C16orf70Q9BSU1 422 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 SF3B5Q9BWJ5 86 aaKnown RBP4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 DPAGT1Q9H3H5 408 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 TMPRSS5Q9H3S3 457 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 ASTN2O75129 1339 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 TTC3P53804 2025 aa4.65□□□□□ -1.67
HMGB3P31-201ENST00000413333 PRSS51A0A1B0GVH4 220 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 ANXA2P2A6NMY6 339 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 MED24O75448 989 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 CLDN14O95500 239 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms