RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 FRMPD4Q14CM0 1322 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 CDK14O94921 469 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 PRNPP04156 253 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 NAE1Q13564 534 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 KDM7AQ6ZMT4 941 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF627Q7L945 461 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 PPTC7Q8NI37 304 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 TNFAIP8L1Q8WVP5 186 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 MFSD3Q96ES6 412 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 PDLIM2Q96JY6 352 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 ZDHHC4Q9NPG8 344 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 SLIT1O75093 1534 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 AKAP12Q02952 1782 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 A0A0J9YVX5 310 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 SCDO00767 359 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 CHADO15335 359 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 PIAS1O75925 651 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 AP2A2O94973 939 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 SEC24AO95486 1093 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 CD47Q08722 323 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 NCSTNQ92542 709 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 RIT1Q92963 219 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 PPP1R14BQ96C90 147 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 PACSIN3Q9UKS6 424 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 NUP50Q9UKX7 468 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 IRS2Q9Y4H2 1338 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 CPNE3O75131 537 aaKnown RBP11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 PTPN2P17706 415 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 ARCN1P48444 511 aaKnown RBP11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 NAGLUP54802 743 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 GXYLT1Q4G148 440 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 POC5Q8NA72 575 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 RDH11Q8TC12 318 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 SEMA4AQ9H3S1 761 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 GOLGA2P5Q9HBQ8 144 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 POLR3BQ9NW08 1133 aaPredicted RBP11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 GRIN2DO15399 1336 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 ANXA2P2A6NMY6 339 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 B4GALT5O43286 388 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 NRP2O60462 931 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 ANXA2P07355 339 aaKnown RBP11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 PRLRP16471 622 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 CD247P20963 164 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 PERM1Q5SV97 790 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 CLEC17AQ6ZS10 378 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 TMPRSS6Q8IU80 811 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 L7N2F9 121 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 VAMP2P63027 116 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 ARHGAP40Q5TG30 622 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 AAGABQ6PD74 315 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 KCTD4Q8WVF5 259 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 STRADBQ9C0K7 418 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 TMEM51Q9NW97 253 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 FMN2Q9NZ56 1722 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 STATHP02808 62 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 ATP5A1P25705 553 aaKnown RBP11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 CTSKP43235 329 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 CAV3P56539 151 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 TMEM126BQ8IUX1 230 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 AADATQ8N5Z0 425 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 WDR18Q9BV38 432 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 CRTAC1Q9NQ79 661 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 MFHAS1Q9Y4C4 1052 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 RAI2Q9Y5P3 530 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 A6NCN8 305 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 RENP00797 406 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 FSTL1Q12841 308 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 DCTN2Q13561 401 aaKnown RBP11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 LIPMQ5VYY2 423 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 KCNK18Q7Z418 384 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 KIAA1143Q96AT1 154 aaPredicted RBP11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 MGME1Q9BQP7 344 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 B3GAT2Q9NPZ5 323 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 SERINC1Q9NRX5 453 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 ABCB8Q9NUT2 735 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 SPATA6Q9NWH7 488 aaPredicted RBP11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 TMEM150CB9EJG8 249 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 RB1P06400 928 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 ADRB2P07550 413 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 SPAM1P38567 509 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 AP2S1P53680 142 aaPredicted RBP11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 PLA2G16P53816 162 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 FOXK1P85037 733 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 QSOX2Q6ZRP7 698 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 TMEM145Q8NBT3 493 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 PIK3C3Q8NEB9 887 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 ETNPPLQ8TBG4 499 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 TMEM68Q96MH6 324 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 TRAPPC9Q96Q05 1148 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 METTL8Q9H825 291 aaKnown RBP11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 ACSS2Q9NR19 701 aa11.12□□□□□ -0.63
PRPF40A-202ENST00000410080 RARAP10276 462 aa11.11□□□□□ -0.63
PRPF40A-202ENST00000410080 CLCNKBP51801 687 aa11.11□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF135P52742 658 aaPredicted RBP11.11□□□□□ -0.63
PRPF40A-202ENST00000410080 ADAM8P78325 824 aa11.11□□□□□ -0.63
PRPF40A-202ENST00000410080 RPL19P84098 196 aaKnown RBP11.11□□□□□ -0.63
PRPF40A-202ENST00000410080 CAP1Q01518 475 aa11.11□□□□□ -0.63
PRPF40A-202ENST00000410080 NTRK3Q16288 839 aa11.11□□□□□ -0.63
PRPF40A-202ENST00000410080 FBXO48Q5FWF7 155 aa11.11□□□□□ -0.63
PRPF40A-202ENST00000410080 TMEM220Q6QAJ8 160 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms