RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 WRAP53Q9BUR4 548 aaKnown RBP5.44□□□□□ -1.54
EPHA4-202ENST00000409854 ERVK-6Q9BXR3 956 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 IRF2BPLQ9H1B7 796 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 MYLK2Q9H1R3 596 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 EPHX3Q9H6B9 360 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 SLC2A4RGQ9NR83 387 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 KCTD5Q9NXV2 234 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 CNOT6Q9ULM6 557 aaKnown RBP5.44□□□□□ -1.54
EPHA4-202ENST00000409854 BRWD1Q9NSI6 2320 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 A0A1W2PQF6 199 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 UBXN8O00124 270 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 QSOX1O00391 747 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 MID1O15344 667 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 TSPAN6O43657 245 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 HSPA4LO95757 839 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 CHRNGP07510 517 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 RPS17P08708 135 aaKnown RBP5.44□□□□□ -1.54
EPHA4-202ENST00000409854 DGKAP23743 735 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 TIE1P35590 1138 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 RPS6KA3P51812 740 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 SEC13P55735 322 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 MRPS21P82921 87 aaKnown RBP5.44□□□□□ -1.54
EPHA4-202ENST00000409854 PRKAA1Q13131 559 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 PON2Q15165 354 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 ZNF658BQ4V348 819 aaPredicted RBP5.44□□□□□ -1.54
EPHA4-202ENST00000409854 ARL13AQ5H913 290 aaPredicted RBP5.44□□□□□ -1.54
EPHA4-202ENST00000409854 KIAA1211LQ6NV74 962 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 CYHR1Q6ZMK1 362 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 TRMT11Q7Z4G4 463 aaKnown RBP5.44□□□□□ -1.54
EPHA4-202ENST00000409854 RASGRP3Q8IV61 690 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 GBP7Q8N8V2 638 aaPredicted RBP5.44□□□□□ -1.54
EPHA4-202ENST00000409854 LRCH3Q96II8 777 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 ILKAPQ9H0C8 392 aaPredicted RBP5.44□□□□□ -1.54
EPHA4-202ENST00000409854 WWP1Q9H0M0 922 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 HEBP1Q9NRV9 189 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 PNPOQ9NVS9 261 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 NUDT4Q9NZJ9 180 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 MBD1Q9UIS9 605 aaPredicted RBP5.44□□□□□ -1.54
EPHA4-202ENST00000409854 DCTN4Q9UJW0 460 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 BLOC1S6Q9UL45 172 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 SLC12A4Q9UP95 1085 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 PLXND1Q9Y4D7 1925 aa5.44□□□□□ -1.54
EPHA4-202ENST00000409854 A0A0G2JND7 137 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 CFAP99D6REC4 459 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 MATN2O00339 956 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 BTN3A1O00481 513 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 RNASEH1O60930 286 aaKnown RBP5.43□□□□□ -1.54
EPHA4-202ENST00000409854 RECQL5O94762 991 aaPredicted RBP5.43□□□□□ -1.54
EPHA4-202ENST00000409854 ENO3P13929 434 aaPredicted RBP5.43□□□□□ -1.54
EPHA4-202ENST00000409854 COL9A1P20849 921 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 TEAD1P28347 426 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 CCR7P32248 378 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 CCR10P46092 362 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 RGS4P49798 205 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 HK3P52790 923 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 AQP5P55064 265 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 SPRED3Q2MJR0 410 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 TTLL9Q3SXZ7 439 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 LEXMQ3ZCV2 418 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 UNC50Q53HI1 259 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 ACSBG2Q5FVE4 666 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 PLEKHS1Q5SXH7 462 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 GPR153Q6NV75 609 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 NEK10Q6ZWH5 1172 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 ADAMTSL2Q86TH1 951 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 IQCF2Q8IXL9 164 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 PELI3Q8N2H9 469 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 PDPRQ8NCN5 879 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 CXorf40AQ8TE69 158 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 MOCOSQ96EN8 888 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 RMI1Q9H9A7 625 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 LIMD1Q9UGP4 676 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 RNF112Q9ULX5 631 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 ZNF232Q9UNY5 417 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 COQ6Q9Y2Z9 468 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 XIRP2A4UGR9 3374 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 SLCO1B7G3V0H7 640 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 KPNA5O15131 536 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 NUAK1O60285 661 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 SYNCRIPO60506 623 aaKnown RBP5.43□□□□□ -1.54
EPHA4-202ENST00000409854 MMP20O60882 483 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 TRIM16O95361 564 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 MPC1LP0DKB6 136 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 MPSTP25325 297 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 WASP42768 502 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 PRLHRP49683 370 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 RPL14P50914 215 aaKnown RBP5.43□□□□□ -1.54
EPHA4-202ENST00000409854 ALDH18A1P54886 795 aaKnown RBP5.43□□□□□ -1.54
EPHA4-202ENST00000409854 SESN3P58005 492 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 GRSF1Q12849 480 aaKnown RBP eCLIP5.43□□□□□ -1.54
EPHA4-202ENST00000409854 BNIP1Q12981 228 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 CCINQ13939 588 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 BCL7AQ4VC05 210 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 IER5LQ5T953 404 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 EPGNQ6UW88 154 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 CCDC121Q6ZUS5 278 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 PHYKPLQ8IUZ5 450 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 KIRREL3Q8IZU9 778 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 MYO1HQ8N1T3 1032 aa5.43□□□□□ -1.54
EPHA4-202ENST00000409854 PTGR2Q8N8N7 351 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms