RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 PRSS56P0CW18 603 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 MYF5P13349 255 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 XRCC1P18887 633 aaPredicted RBP13.75□□□□□ -0.21
GYPC-203ENST00000409836 OGNP20774 298 aaKnown RBP13.75□□□□□ -0.21
GYPC-203ENST00000409836 KCNA4P22459 653 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 NMBRP28336 390 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 TTPAP49638 278 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 PDX1P52945 283 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 EPHA4P54764 986 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 MAZP56270 477 aaKnown RBP13.75□□□□□ -0.21
GYPC-203ENST00000409836 FOXC1Q12948 553 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 SEMA3AQ14563 771 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 TCEA2Q15560 299 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 TMEM220Q6QAJ8 160 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 MAATS1Q7Z4T9 603 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 CCNJLQ8IV13 435 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 RBM12BQ8IXT5 1001 aaKnown RBP13.75□□□□□ -0.21
GYPC-203ENST00000409836 LMNTD2Q8IXW0 634 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 MAPK15Q8TD08 544 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 PATE1Q8WXA2 126 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 GATA6Q92908 595 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 MFSD3Q96ES6 412 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 SGF29Q96ES7 293 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 DCUN1D1Q96GG9 259 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 KRT12Q99456 494 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 TRIM51Q9BSJ1 452 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 VPS37BQ9H9H4 285 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 CATSPERZQ9NTU4 200 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 POT1Q9NUX5 634 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 MARCH4Q9P2E8 410 aaPredicted RBP13.75□□□□□ -0.21
GYPC-203ENST00000409836 KLK13Q9UKR3 277 aa13.75□□□□□ -0.21
GYPC-203ENST00000409836 WDFY3Q8IZQ1 3526 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 A0A1W2PQM1 296 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 CCDC78A2IDD5 438 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 CPED1A4D0V7 1026 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 E7ESA3 106 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 RAD51CO43502 376 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 POP7O75817 140 aaKnown RBP13.74□□□□□ -0.21
GYPC-203ENST00000409836 PAMP19021 973 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 RPS3P23396 243 aaKnown RBP eCLIP13.74□□□□□ -0.214e-6■■■■■ 40.4
GYPC-203ENST00000409836 RPL21P46778 160 aaKnown RBP13.74□□□□□ -0.21
GYPC-203ENST00000409836 RPA4Q13156 261 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 FRG1Q14331 258 aaKnown RBP13.74□□□□□ -0.21
GYPC-203ENST00000409836 KIF26BQ2KJY2 2108 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 ANKRD20A4Q4UJ75 823 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 FNBP1LQ5T0N5 605 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 RNF187Q5TA31 235 aaPredicted RBP13.74□□□□□ -0.21
GYPC-203ENST00000409836 DUPD1Q68J44 220 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 FAM83HQ6ZRV2 1179 aaPredicted RBP13.74□□□□□ -0.21
GYPC-203ENST00000409836 MICALCLQ6ZW33 695 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 LRRC6Q86X45 466 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 SEC14L1Q92503 715 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 TCF12Q99081 682 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 TTC1Q99614 292 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 WDR83Q9BRX9 315 aaKnown RBP13.74□□□□□ -0.21
GYPC-203ENST00000409836 ERP44Q9BS26 406 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 EPB41L1Q9H4G0 881 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 FAM96AQ9H5X1 160 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 SAMD15Q9P1V8 674 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 WHRNQ9P202 907 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 LRIT1Q9P2V4 623 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 DKK4Q9UBT3 224 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 ACSL5Q9ULC5 683 aa13.74□□□□□ -0.21
GYPC-203ENST00000409836 USP24Q9UPU5 2620 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 EPG5Q9HCE0 2579 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 BHMG1C9JSJ3 638 aaPredicted RBP13.73□□□□□ -0.21
GYPC-203ENST00000409836 F8W8V4 182 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 GOLGA8MH3BSY2 632 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 PPM1DO15297 605 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 CD3EAPO15446 510 aaKnown RBP13.73□□□□□ -0.21
GYPC-203ENST00000409836 TTC4O95801 387 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 TOP3BO95985 862 aaKnown RBP13.73□□□□□ -0.21
GYPC-203ENST00000409836 PGAM1P18669 254 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 IDSP22304 550 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 CCKBRP32239 447 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 PPARGP37231 505 aaPredicted RBP13.73□□□□□ -0.21
GYPC-203ENST00000409836 GPLD1P80108 840 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 HHEXQ03014 270 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 C2orf54Q08AI8 447 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 NFE2L1Q14494 772 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 PLA2G4EQ3MJ16 856 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 FASTKD1Q53R41 847 aaKnown RBP13.73□□□□□ -0.21
GYPC-203ENST00000409836 DNAJC21Q5F1R6 531 aaKnown RBP13.73□□□□□ -0.21
GYPC-203ENST00000409836 STEAP4Q687X5 459 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 IGF2-ASQ6U949 168 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 BEND7Q8N7W2 519 aaPredicted RBP13.73□□□□□ -0.21
GYPC-203ENST00000409836 BBOF1Q8ND07 529 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 OR6P1Q8NGX9 317 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 SH3KBP1Q96B97 665 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 STAMBPL1Q96FJ0 436 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 FCRL3Q96P31 734 aaPredicted RBP13.73□□□□□ -0.21
GYPC-203ENST00000409836 DEPDC7Q96QD5 511 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 P2RY12Q9H244 342 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 PLAC1Q9HBJ0 212 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 PRDM8Q9NQV8 689 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 SCHIP1Q9P0W5 487 aaPredicted RBP13.73□□□□□ -0.21
GYPC-203ENST00000409836 ZNF624Q9P2J8 865 aaPredicted RBP13.73□□□□□ -0.21
GYPC-203ENST00000409836 CPNE7Q9UBL6 633 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 CLCA2Q9UQC9 943 aa13.73□□□□□ -0.21
GYPC-203ENST00000409836 ADAMTS20P59510 1910 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms