RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PATE1Q8WXA2 126 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 SGF29Q96ES7 293 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 ZNF778Q96MU6 729 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 GFM1Q96RP9 751 aaKnown RBP10.72□□□□□ -0.69
CHMP3-205ENST00000409810 KRT12Q99456 494 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 SLC38A3Q99624 504 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 TSSK1BQ9BXA7 367 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-205ENST00000409810 ZMYND15Q9H091 742 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 PRDM8Q9NQV8 689 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 SLC23A2Q9UGH3 650 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 COL27A1Q8IZC6 1860 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-205ENST00000409810 KIF26BQ2KJY2 2108 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 C17orf113A0A1B0GUU1 675 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 FAM237BA0A1B0GVD1 139 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 FAM149AA5PLN7 773 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 FAM187AA6NFU0 413 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 PRR19A6NJB7 356 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 D6RAR5 112 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 NTN3O00634 580 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 TTI1O43156 1089 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 AVILO75366 819 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 FTH1P02794 183 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 OR56A5P0C7T3 313 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 XRCC1P18887 633 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 NMBRP28336 390 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 ALDH4A1P30038 563 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 MAGEA3P43357 314 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 PPM1FP49593 454 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 CDKN1CP49918 316 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 GPLD1P80108 840 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 B4GALNT1Q00973 533 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 NFE2L1Q14494 772 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 KCTD19Q17RG1 926 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 MAP9Q49MG5 647 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 RNF187Q5TA31 235 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 KIAA0930Q6ICG6 404 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 MRNIPQ6NTE8 343 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 SDCCAG8Q86SQ7 713 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 CAND1Q86VP6 1230 aaKnown RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 SFTPA2Q8IWL1 248 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 RBM12BQ8IXT5 1001 aaKnown RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 PIANPQ8IYJ0 282 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 DCBLD1Q8N8Z6 715 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 Q8N9G6 341 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 OR10G6Q8NH81 332 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 CXorf40BQ96DE9 158 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 MFSD3Q96ES6 412 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 SNF8Q96H20 258 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 AHCYL2Q96HN2 611 aaKnown RBP10.71□□□□□ -0.69
CHMP3-205ENST00000409810 TMEM74Q96NL1 305 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 DPYSL5Q9BPU6 564 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 CCM2Q9BSQ5 444 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 EPB41L1Q9H4G0 881 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 POT1Q9NUX5 634 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 KCNK4Q9NYG8 393 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 CPNE7Q9UBL6 633 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 RABGEF1Q9UJ41 708 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 CDC23Q9UJX2 597 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 ACSL5Q9ULC5 683 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 MAD1L1Q9Y6D9 718 aa10.71□□□□□ -0.69
CHMP3-205ENST00000409810 TRBV23OR9-2A0A075B6M9 112 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 TMEM8BA6NDV4 472 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 EFCAB8A8MWE9 144 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 PPM1DO15297 605 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 CD3EAPO15446 510 aaKnown RBP10.7□□□□□ -0.7
CHMP3-205ENST00000409810 DUX1O43812 170 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 CSO75390 466 aaKnown RBP10.7□□□□□ -0.7
CHMP3-205ENST00000409810 URI1O94763 535 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-205ENST00000409810 USP1O94782 785 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 EML2O95834 649 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 SLC35G4P0C7Q5 338 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 PRSS56P0CW18 603 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 RPL10P27635 214 aaKnown RBP10.7□□□□□ -0.7
CHMP3-205ENST00000409810 EPHA4P54764 986 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 CLDN6P56747 220 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 UBE2IP63279 158 aaKnown RBP10.7□□□□□ -0.7
CHMP3-205ENST00000409810 CCL7P80098 99 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 PLOD1Q02809 727 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-205ENST00000409810 C2orf54Q08AI8 447 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 TARDBPQ13148 414 aaKnown RBP eCLIP10.7□□□□□ -0.7
CHMP3-205ENST00000409810 TUBB2AQ13885 445 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 WHAMMP3Q1A5X7 153 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-205ENST00000409810 METRNLQ641Q3 311 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 LRRC6Q86X45 466 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 PDIK1LQ8N165 341 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 GABPB2Q8TAK5 448 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-205ENST00000409810 ZNF592Q92610 1267 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 ZNF669Q96BR6 464 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-205ENST00000409810 NXPE2Q96DL1 559 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 STAMBPL1Q96FJ0 436 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 TRIM51Q9BSJ1 452 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 NAT9Q9BTE0 207 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 TUBB2BQ9BVA1 445 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 STRADBQ9C0K7 418 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 UCK1Q9HA47 277 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 GNPTGQ9UJJ9 305 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 VPS9D1Q9Y2B5 631 aa10.7□□□□□ -0.7
CHMP3-205ENST00000409810 RPS6KL1Q9Y6S9 549 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms